WormBase Tree Display for Gene: WBGene00015485
expand all nodes | collapse all nodes | view schema
WBGene00015485 | SMap | S_parent | Sequence | C05D11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C05D11.8 | |||||||
Molecular_name | C05D11.8 | ||||||||
C05D11.8.1 | |||||||||
CE54171 | |||||||||
Other_name | CELE_C05D11.8 | Accession_evidence | NDB | BX284603 | |||||
Public_name | C05D11.8 | ||||||||
DB_info | Database | AceView | gene | 3H512 | |||||
WormQTL | gene | WBGene00015485 | |||||||
WormFlux | gene | WBGene00015485 | |||||||
NDB | locus_tag | CELE_C05D11.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015485|UniProtKB=Q11187 | |||||||
family | PTHR21705 | ||||||||
NCBI | gene | 182260 | |||||||
RefSeq | protein | NM_001379762.1 | |||||||
SwissProt | UniProtAcc | Q11187 | |||||||
TREEFAM | TREEFAM_ID | TF313941 | |||||||
UniProt_GCRP | UniProtAcc | Q11187 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (68) | |||||||||
Strain | WBStrain00035529 | ||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP3372 | ||||||||
Ortholog (36) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABalaapppa; ABalapaapa; ABplapaaap; ABprapaaap; and germ line based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and hsf-1 based on tiling array; RNA-seq; and microarray studies. Is affected by nine chemicals including aldicarb; rotenone; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Family of unknown function (DUF5917); FHF complex subunit HOOK-interacting protein, C-terminal; FHF complex subunit HOOK interacting protein; Retinoic acid induced 16-like protein; and Phosphorylation site. Is an ortholog of human FHIP1A (FHF complex subunit HOOK interacting protein 1A) and FHIP1B (FHF complex subunit HOOK interacting protein 1B). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C05D11.8 | |||||||
Corresponding_CDS_history | C05D11.8:wp275 | ||||||||
Corresponding_transcript | C05D11.8.1 | ||||||||
Other_sequence | AYC03264_1 | ||||||||
FC539236.1 | |||||||||
AE00303 | |||||||||
JI165754.1 | |||||||||
Associated_feature | WBsf666990 | ||||||||
WBsf666991 | |||||||||
WBsf992761 | |||||||||
WBsf992762 | |||||||||
Experimental_info | RNAi_result | WBRNAi00085085 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039741 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010200 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005321 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001764 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1010522 | ||||||||
Expr1036623 | |||||||||
Expr1143832 | |||||||||
Expr2000463 | |||||||||
Expr2018686 | |||||||||
Drives_construct | WBCnstr00028810 | ||||||||
Construct_product | WBCnstr00028810 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (63) | |||||||||
Interaction (42) | |||||||||
Map_info | Positive | Positive_clone | C05D11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | -1.28191 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |