WormBase Tree Display for Gene: WBGene00015362
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WBGene00015362 | SMap | S_parent | Sequence | C02H6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxa-105 | Person_evidence | WBPerson655 | |||||
Sequence_name | C02H6.2 | ||||||||
Molecular_name | C02H6.2 | ||||||||
C02H6.2.1 | |||||||||
CE07858 | |||||||||
Other_name | CELE_C02H6.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | fbxa-105 | ||||||||
DB_info | Database | AceView | gene | 5H870 | |||||
WormQTL | gene | WBGene00015362 | |||||||
WormFlux | gene | WBGene00015362 | |||||||
NDB | locus_tag | CELE_C02H6.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015362|UniProtKB=O17054 | |||||||
family | PTHR23015 | ||||||||
NCBI | gene | 179126 | |||||||
RefSeq | protein | NM_072491.7 | |||||||
TREEFAM | TREEFAM_ID | TF322006 | |||||||
TrEMBL | UniProtAcc | O17054 | |||||||
UniProt_GCRP | UniProtAcc | O17054 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-105 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxa | ||||||||
Allele (26) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00029221 | ||||||||
Ortholog | WBGene00023954 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
WBGene00033413 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00035626 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00037960 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00041155 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00041890 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00065812 | Caenorhabditis remanei | From_analysis | OMA | ||||||
WBGene00122765 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
chrV_pilon.g14687 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (218) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Involved in innate immune response. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C02H6.2 | |||||||
Corresponding_transcript | C02H6.2.1 | ||||||||
Associated_feature | WBsf652774 | ||||||||
WBsf1000459 | |||||||||
WBsf1019911 | |||||||||
WBsf233945 | |||||||||
Experimental_info | RNAi_result (4) | ||||||||
Expr_pattern | Expr1028925 | ||||||||
Expr1143574 | |||||||||
Expr2011452 | |||||||||
Expr2029690 | |||||||||
Drives_construct | WBCnstr00028902 | ||||||||
Construct_product | WBCnstr00028902 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (197) | |||||||||
Interaction | WBInteraction000253519 | ||||||||
Map_info | Map | V | Position | 0.748211 | Error | 0.000154 | |||
Positive | Positive_clone | C02H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00012854 | ||||||||
WBPaper00028789 | |||||||||
WBPaper00062289 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |