WormBase Tree Display for Gene: WBGene00015313

WBGene00015313 SMap: S_parent: Sequence: C01G8
  Identity: Version: 2
    Name: CGC_name: hpo-32 Paper_evidence: WBPaper00038231
          Person_evidence: WBPerson26
      Sequence_name: C01G8.6
      Molecular_name: C01G8.6
        C01G8.6.1
        CE07807
      Other_name: CELE_C01G8.6 Accession_evidence: NDB BX284601
      Public_name: hpo-32
    DB_info: Database: AceView gene 1F868
        WormQTL gene WBGene00015313
        WormFlux gene WBGene00015313
        NDB locus_tag CELE_C01G8.6
        NCBI gene 172175
        RefSeq protein NM_059160.7
        TREEFAM TREEFAM_ID TF316083
        TrEMBL UniProtAcc P91017
        UniProt_GCRP UniProtAcc P91017
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 26 Apr 2011 13:31:47 WBPerson2970 Name_change: CGC_name: hpo-32
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpo
    Allele (26)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP1232
    Ortholog: WBGene00033300 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00060032 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CSP28.g1624 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g698 Caenorhabditis becei From_analysis: WormBase-Compara
      Cni-hpo-32 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20509 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_05046 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002558 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrI_pilon.g882 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in AVK; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; proteomic; and RNA-seq studies. Is affected by fifteen chemicals including manganese chloride; bisphenol S; and Alovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C01G8.6
    Corresponding_transcript: C01G8.6.1
    Associated_feature: WBsf983647
      WBsf983648
      WBsf983649
      WBsf1009801
      WBsf219403
      WBsf219404
  Experimental_info: RNAi_result: WBRNAi00082458 Inferred_automatically: RNAi_primary
      WBRNAi00088775 Inferred_automatically: RNAi_primary
      WBRNAi00061722 Inferred_automatically: RNAi_primary
      WBRNAi00088668 Inferred_automatically: RNAi_primary
      WBRNAi00002882 Inferred_automatically: RNAi_primary
      WBRNAi00039367 Inferred_automatically: RNAi_primary
      WBRNAi00039366 Inferred_automatically: RNAi_primary
      WBRNAi00028314 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014203
      Expr1036561
      Expr1143482
      Expr2012572
      Expr2030809
    Drives_construct: WBCnstr00028943
    Construct_product: WBCnstr00028943
    Microarray_results (17)
    Expression_cluster (141)
    Interaction (14)
  Map_info: Map: I Position: -0.155007 Error: 0.001654
    Positive: Positive_clone: C01G8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00041771
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene