WormBase Tree Display for Gene: WBGene00015235
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| WBGene00015235 | SMap | S_parent | Sequence | B0511 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | cdc-26 | Person_evidence | WBPerson8 | |||||
| WBPerson205 | |||||||||
| Sequence_name | B0511.9 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | mat-4 | Person_evidence | WBPerson8 | ||||||
| WBPerson205 | |||||||||
| tag-265 | |||||||||
| CELE_B0511.9 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | cdc-26 | ||||||||
| DB_info | Database | AceView | gene | 1L216 | |||||
| WormQTL | gene | WBGene00015235 | |||||||
| WormFlux | gene | WBGene00015235 | |||||||
| NDB | locus_tag | CELE_B0511.9 | |||||||
| NCBI | gene | 172958 | |||||||
| RefSeq | protein | NM_171844.7 | |||||||
| NM_001264516.3 | |||||||||
| NM_001264518.2 | |||||||||
| NM_170919.7 | |||||||||
| SwissProt | UniProtAcc | G4RT11 | |||||||
| TREEFAM | TREEFAM_ID | TF319639 | |||||||
| UniProt_GCRP | UniProtAcc | G4RT11 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Sep 2006 10:43:24 | WBPerson1847 | Name_change | CGC_name | mat-4 | ||||
| 3 | 16 Feb 2007 14:30:49 | WBPerson2970 | Name_change | CGC_name | cdc-26 | ||||
| Other_name | mat-4 | ||||||||
| 4 | 06 Mar 2007 10:44:50 | WBPerson2970 | Event | Acquires_merge | WBGene00044320 | ||||
| Name_change | Other_name | tag-265 | |||||||
| Acquires_merge | WBGene00044320 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cdc | ||||||||
| Allele (22) | |||||||||
| Strain | WBStrain00036119 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00009130 | ||||||||
| 00009131 | |||||||||
| 00009132 | |||||||||
| 00009133 | |||||||||
| 00009134 | |||||||||
| 00009135 | |||||||||
| Contained_in_operon | CEOP1632 | ||||||||
| Ortholog (16) | |||||||||
| Structured_description | Concise_description | cdc-26 encodes, by alternative splicing, two isoforms of a probableanaphase-promoting complex/cyclosome (APC/C) component that has crypticorthology to budding yeast Cdc26p, and that is required for normalmeiosis and asymmetric one-cell embryonic division; although CDC-26 andCdc26p have little obvious sequence similarity, they do share a commonmotif in their N-terminal domains, and yeast cdc26 mutants can berescued by transgenic C. elegans CDC-26; CDC-26 binds EMB-27 in yeasttwo-hybrid experiments; weak cdc-26(RNAi) induces loss of asymmetryduring the first embryonic cell division of AB/P1, while strongcdc-26(RNAi) arrests embryos at meiotic metaphase I; in weakly defectiveone-cell cdc-26(RNAi) embryos, PAR-3 is mislocalized from the anteriorto the entire cortex, while PAR-2 is mislocalized from the posteriorcortex to cytoplasm. | Paper_evidence | WBPaper00006332 | |||||
| WBPaper00029199 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 08 May 2007 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in cell division; meiotic cell cycle; and protein ubiquitination. Predicted to be located in nucleus. Expressed in germ line. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0511.9a | |||||||
| B0511.9b | |||||||||
| B0511.9c | |||||||||
| B0511.9d | |||||||||
| Corresponding_CDS_history | B0511.9a:wp185 | ||||||||
| B0511.9a:wp214 | |||||||||
| B0511.9b:wp185 | |||||||||
| Corresponding_transcript | B0511.9a.1 | ||||||||
| B0511.9b.1 | |||||||||
| B0511.9c.1 | |||||||||
| B0511.9d.1 | |||||||||
| Other_sequence | CBC13072_1 | ||||||||
| CR01858 | |||||||||
| CRC01910_1 | |||||||||
| Associated_feature | WBsf220266 | ||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr4084 | ||||||||
| Expr1012460 | |||||||||
| Expr1036525 | |||||||||
| Expr1143307 | |||||||||
| Expr2009783 | |||||||||
| Expr2028023 | |||||||||
| Drives_construct | WBCnstr00028983 | ||||||||
| Construct_product | WBCnstr00028983 | ||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (120) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Map | I | Position | 5.05944 | Error | 9.9e-05 | |||
| Positive | Positive_clone | B0511 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024733 | ||||||||
| WBPaper00029199 | |||||||||
| WBPaper00041771 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
