WormBase Tree Display for Gene: WBGene00015200

WBGene00015200 SMap: S_parent: Sequence: B0454
  Identity: Version: 2
    Name: CGC_name: lido-13
      Sequence_name: B0454.9
      Molecular_name: B0454.9
        B0454.9.1
        CE07759
      Other_name: CELE_B0454.9 Accession_evidence: NDB BX284602
      Public_name: lido-13
    DB_info: Database: AceView gene 2D344
        WormQTL gene WBGene00015200
        WormFlux gene WBGene00015200
        NDB locus_tag CELE_B0454.9
        Panther gene CAEEL|WormBase=WBGene00015200|UniProtKB=O17173
          family PTHR32020
        NCBI gene 173651
        RefSeq protein NM_062034.8
        TREEFAM TREEFAM_ID TF320081
        TrEMBL UniProtAcc O17173
        UniProt_GCRP UniProtAcc O17173
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Nov 2018 16:28:50 WBPerson1983 Name_change: CGC_name: lido-13
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lido
    Allele (36)
    RNASeq_FPKM (74)
    GO_annotation: 00029395
    Ortholog (12)
    Paralog (17)
    Structured_description: Automated_description: Predicted to be located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0454.9
    Corresponding_transcript: B0454.9.1
    Associated_feature: WBsf655352
      WBsf987140
      WBsf222821
      WBsf222822
  Experimental_info: RNAi_result: WBRNAi00039075 Inferred_automatically: RNAi_primary
      WBRNAi00028152 Inferred_automatically: RNAi_primary
      WBRNAi00009788 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010991
      Expr1036510
      Expr1143237
      Expr2000195
      Expr2018415
    Drives_construct: WBCnstr00029009
    Construct_product: WBCnstr00029009
    Microarray_results (17)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032031:DConiospora_downregulated_cDNA_12h
      WBPaper00033065:isp-1-1(qm150)_upregulated
      WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
      WBPaper00040285:H2S_24hr_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Oogenic
      WBPaper00045774:clk-1_downregulated
      WBPaper00048926:miaserin_upregulated_adult-day5
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_3
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051558:fog-2(q71)_regulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053388:dauer_regulated_Cluster2
      WBPaper00053599:female_vs_male_upregulated
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055827:pfd-6(gk493446)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_downregulated
      WBPaper00057288:Cold_upregulated_transcript
      WBPaper00059440:LAG-1_activated_48hr-auxin
      WBPaper00059471:EGL-43_interacting
      WBPaper00059763:neuron_expressed
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061007:HB101_downregulated
      WBPaper00061007:S.aquatilis_downregulated
      WBPaper00061466:nath-10(icb99)_downregulated
      WBPaper00061479:ubc-9(ne4833)_upregulated
      WBPaper00061527:R07E4.5-skp-1_1608
      WBPaper00062056:met-2(n4256)_upregulated
      WBPaper00062146:MOG-7-degron_2h_regulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062456:doxycycline_downregulated_CB4856_transcript
      WBPaper00062456:doxycycline_downregulated_N2_transcript
      WBPaper00062672:let-418(n3536)dcp-66(RNAi)_downregulated
      WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064315:mes-3(bn199)_upregulated_PGCs
      WBPaper00064315:mes-4(bn73)_upregulated_EGCs
      WBPaper00064716:paraquat_upregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00025032:cluster_192
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00027342:alpha-Synuclein(A53T)_downregulated
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:StarveUp4
      WBPaper00035227:heat_shock_regulated
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00036123:Cadmium_regulated
      WBPaper00036286:Pattern_F
      WBPaper00038427:lin-54_germline_changed
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041906:I-3690_vs_OP50_3d
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00048637:lin-35(n745)_starvation_downregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_ET
      [cgc5767]:expression_class_ET_max(143_min)
      [cgc5767]:expression_class_E_pi(83_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc5767]:expression_class_MET
      [cgc6390]:mixed_oogenesis-somatic
    Interaction: WBInteraction000366400
      WBInteraction000546062
  Map_info: Positive: Positive_clone: B0454 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -8.6919
  Reference: WBPaper00032961
  Method: Gene