WormBase Tree Display for Gene: WBGene00015162

WBGene00015162 SMap: S_parent: Sequence: B0361
  Identity: Version: 2
    Name: CGC_name: algn-11 Person_evidence: WBPerson261
      Sequence_name: B0361.8
      Molecular_name: B0361.8
        B0361.8.1
        CE26792
      Other_name: CELE_B0361.8 Accession_evidence: NDB BX284603
      Public_name: algn-11
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 29 Apr 2015 12:07:40 WBPerson2970 Name_change: CGC_name: algn-11
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: algn
    Allele (38)
    Strain: WBStrain00047467
    RNASeq_FPKM (74)
    GO_annotation (13)
    Contained_in_operon: CEOP3426
    Ortholog: WBGene00066411 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00035647 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00158458 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125651 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00222037 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g4890 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7280 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18131 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10344 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15369 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25768 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1205 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2283 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4641 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1352 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00227.g7399 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-algn-11 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8115 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00338.g9700 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_01903.g23790 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19812 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008715 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g1355 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30034200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8129 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00218762 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00246456 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00262101 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286277 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000004993 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0037108 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030131-7282 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:32456 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2142632 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1564725 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00008431 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017282 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044623 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity. Predicted to be involved in oligosaccharide-lipid intermediate biosynthetic process and protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ip. Is an ortholog of human ALG11 (ALG11 alpha-1,2-mannosyltransferase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0080567 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:32456)
  Molecular_info: Corresponding_CDS: B0361.8
    Corresponding_transcript: B0361.8.1
    Other_sequence (58)
    Associated_feature: WBsf667056
      WBsf992976
      WBsf992977
      WBsf1015212
      WBsf226952
  Experimental_info: RNAi_result (20)
    Expr_pattern: Expr1022848
      Expr1036491
      Expr1143149
      Expr2009293
      Expr2027530
    Drives_construct: WBCnstr00029040
    Construct_product: WBCnstr00029040
    Microarray_results (16)
    Expression_cluster (78)
    Interaction: WBInteraction000121059
      WBInteraction000202778
      WBInteraction000301029
      WBInteraction000310430
      WBInteraction000585736
  Map_info: Map: III Position: -0.756347
    Positive: Positive_clone: B0361 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028483
    WBPaper00028985
    WBPaper00038491
    WBPaper00041771
    WBPaper00045573
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene