WormBase Tree Display for Gene: WBGene00015148

WBGene00015148 SMap: S_parent: Sequence: B0336
  Identity: Version: 2
    Name (5)
    DB_info: Database: AceView gene 3G798
        WormQTL gene WBGene00015148
        WormFlux gene WBGene00015148
        NDB locus_tag CELE_B0336.11
        Panther gene CAEEL|WormBase=WBGene00015148|UniProtKB=Q10956
          family PTHR46384
        NCBI gene 175798
        RefSeq protein NM_001392109.1
            NM_065831.6
        TREEFAM TREEFAM_ID TF351054
        TrEMBL UniProtAcc Q10956
            H2KY79
        UniProt_GCRP UniProtAcc Q10956
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 26 Apr 2011 13:31:47 WBPerson2970 Name_change: CGC_name: hpo-28
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpo
    Allele (33)
    Strain: WBStrain00037323
      WBStrain00037341
      WBStrain00037365
    RNASeq_FPKM (74)
    GO_annotation: 00021400
      00021401
      00021402
      00021403
    Ortholog: WBGene00030678 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00055609 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00151442 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00134748 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00222027 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g4183 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7261 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1761 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9744 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15137 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g17709 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15985 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g20794 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4696 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g6467 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00290.g8606 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-hpo-28 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold568.g4205 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00216.g7243 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18493 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010605 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09553 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g3002 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30135900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7773 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00213518 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00245055 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00275836 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00262006 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0052407 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      FB:FBgn0053523 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-041114-1 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:28381 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1924013 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1563952 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to be located in endomembrane system and endoplasmic reticulum-endosome membrane contact site. Is an ortholog of human MOSPD2 (motile sperm domain containing 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0336.11a
      B0336.11b
    Corresponding_CDS_history: B0336.11a:wp150
      B0336.11b:wp261
    Corresponding_transcript: B0336.11a.1
      B0336.11b.1
    Other_sequence (29)
    Associated_feature: WBsf651073
      WBsf666459
      WBsf666919
      WBsf666920
      WBsf666921
      WBsf666922
      WBsf992495
      WBsf226722
  Experimental_info: RNAi_result: WBRNAi00088661 Inferred_automatically: RNAi_primary
      WBRNAi00088768 Inferred_automatically: RNAi_primary
      WBRNAi00005271 Inferred_automatically: RNAi_primary
      WBRNAi00081124 Inferred_automatically: RNAi_primary
      WBRNAi00009711 Inferred_automatically: RNAi_primary
      WBRNAi00028093 Inferred_automatically: RNAi_primary
      WBRNAi00038940 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1026152
      Expr1036481
      Expr1143121
      Expr2012567
      Expr2030804
    Drives_construct: WBCnstr00029050
    Construct_product: WBCnstr00029050
    Microarray_results (25)
    Expression_cluster (158)
    Interaction (61)
  Map_info: Map: III Position: -1.44867 Error: 0.000585
    Positive: Positive_clone: B0336 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00034662
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene