WormBase Tree Display for Gene: WBGene00015148
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WBGene00015148 | SMap | S_parent | Sequence | B0336 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | hpo-28 | Paper_evidence | WBPaper00038231 | |||||
Person_evidence | WBPerson26 | ||||||||
Sequence_name | B0336.11 | ||||||||
Molecular_name | B0336.11a | ||||||||
B0336.11a.1 | |||||||||
CE39202 | |||||||||
B0336.11b | |||||||||
CE52296 | |||||||||
B0336.11b.1 | |||||||||
Other_name | CELE_B0336.11 | Accession_evidence | NDB | BX284603 | |||||
Public_name | hpo-28 | ||||||||
DB_info | Database | AceView | gene | 3G798 | |||||
WormQTL | gene | WBGene00015148 | |||||||
WormFlux | gene | WBGene00015148 | |||||||
NDB | locus_tag | CELE_B0336.11 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015148|UniProtKB=Q10956 | |||||||
family | PTHR46384 | ||||||||
NCBI | gene | 175798 | |||||||
RefSeq | protein | NM_001392109.1 | |||||||
NM_065831.6 | |||||||||
TREEFAM | TREEFAM_ID | TF351054 | |||||||
TrEMBL | UniProtAcc | Q10956 | |||||||
H2KY79 | |||||||||
UniProt_GCRP | UniProtAcc | Q10956 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 26 Apr 2011 13:31:47 | WBPerson2970 | Name_change | CGC_name | hpo-28 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hpo | ||||||||
Allele (33) | |||||||||
Strain | WBStrain00037323 | ||||||||
WBStrain00037341 | |||||||||
WBStrain00037365 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00021400 | ||||||||
00021401 | |||||||||
00021402 | |||||||||
00021403 | |||||||||
Ortholog (35) | |||||||||
Structured_description | Automated_description | Predicted to be located in endomembrane system and endoplasmic reticulum-endosome membrane contact site. Is an ortholog of human MOSPD2 (motile sperm domain containing 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | B0336.11a | |||||||
B0336.11b | |||||||||
Corresponding_CDS_history (2) | |||||||||
Corresponding_transcript | B0336.11a.1 | ||||||||
B0336.11b.1 | |||||||||
Other_sequence (29) | |||||||||
Associated_feature | WBsf651073 | ||||||||
WBsf666459 | |||||||||
WBsf666919 | |||||||||
WBsf666920 | |||||||||
WBsf666921 | |||||||||
WBsf666922 | |||||||||
WBsf992495 | |||||||||
WBsf226722 | |||||||||
Experimental_info | RNAi_result | WBRNAi00088661 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00088768 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005271 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00081124 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00009711 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028093 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038940 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026152 | ||||||||
Expr1036481 | |||||||||
Expr1143121 | |||||||||
Expr2012567 | |||||||||
Expr2030804 | |||||||||
Drives_construct | WBCnstr00029050 | ||||||||
Construct_product | WBCnstr00029050 | ||||||||
Microarray_results (25) | |||||||||
Expression_cluster (158) | |||||||||
Interaction (61) | |||||||||
Map_info | Map | III | Position | -1.44867 | Error | 0.000585 | |||
Positive | Positive_clone | B0336 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00034662 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |