WormBase Tree Display for Gene: WBGene00015142
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| WBGene00015142 | SMap | S_parent | Sequence | B0310 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0310.6 | |||||||
| Molecular_name | B0310.6 | ||||||||
| B0310.6.1 | |||||||||
| CE03879 | |||||||||
| Other_name | CELE_B0310.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | B0310.6 | ||||||||
| DB_info | Database | AceView | gene | XB150 | |||||
| WormQTL | gene | WBGene00015142 | |||||||
| NDB | locus_tag | CELE_B0310.6 | |||||||
| NCBI | gene | 24104124 | |||||||
| RefSeq | protein | NM_001307896.2 | |||||||
| SwissProt | UniProtAcc | Q10942 | |||||||
| TREEFAM | TREEFAM_ID | TF322597 | |||||||
| UniProt_GCRP | UniProtAcc | Q10942 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (12) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00030007 | Caenorhabditis briggsae | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00060275 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00156727 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00130310 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| WBGene00130913 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| WBGene00036901 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| CSP26.g5802 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP28.g13425 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g20736 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP32.g4057 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| Cni-B0310.6 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold630.g18146 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| FL83_03243 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_022165 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Sp34_X0020600 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g18288 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00012051 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00012052 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in MSaapaapa; MSpapaapa; g2; rectal epithelial cell; and touch receptor neurons based on single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on tiling array; RNA-seq; and microarray studies. Is affected by nine chemicals including 1-methylnicotinamide; multi-walled carbon nanotube; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0310.6 | |||||||
| Corresponding_transcript | B0310.6.1 | ||||||||
| Associated_feature | WBsf653651 | ||||||||
| WBsf236927 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009698 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038921 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028085 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078361 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027086 | ||||||||
| Expr1143103 | |||||||||
| Expr2000138 | |||||||||
| Expr2018356 | |||||||||
| Drives_construct | WBCnstr00029055 | ||||||||
| Construct_product | WBCnstr00029055 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction (34) | |||||||||
| Map_info | Positive | Positive_clone | B0310 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -19.6893 | |||||||
| Method | Gene |
