WormBase Tree Display for Gene: WBGene00015116
expand all nodes | collapse all nodes | view schema
| WBGene00015116 | SMap | S_parent | Sequence | B0286 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | paic-1 | Person_evidence | WBPerson25639 | |||||
| Author_evidence | Wendy Hanna-Rosed | ||||||||
| Sequence_name | B0286.3 | ||||||||
| Molecular_name | B0286.3 | ||||||||
| B0286.3.1 | |||||||||
| CE03863 | |||||||||
| Other_name | pacs-1 | ||||||||
| CELE_B0286.3 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | paic-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Nov 2015 12:33:59 | WBPerson2970 | Name_change | CGC_name | pacs-1 | ||||
| 3 | 15 Jul 2019 14:29:07 | WBPerson1983 | Name_change | CGC_name | paic-1 | ||||
| Other_name | pacs-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | paic | ||||||||
| Allele (48) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Enables identical protein binding activity. Predicted to be involved in 'de novo' IMP biosynthetic process. Human ortholog(s) of this gene implicated in schizophrenia. Is an ortholog of human PAICS (phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:5419 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8587) | ||||
| Molecular_info | Corresponding_CDS | B0286.3 | |||||||
| Corresponding_transcript | B0286.3.1 | ||||||||
| Other_sequence (104) | |||||||||
| Associated_feature | WBsf649998 | ||||||||
| WBsf665458 | |||||||||
| WBsf981185 | |||||||||
| WBsf222914 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038882 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009674 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072881 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103145 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028065 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014235 | ||||||||
| Expr1036460 | |||||||||
| Expr1143070 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (232) | |||||||||
| Interaction | WBInteraction000143328 | ||||||||
| WBInteraction000155812 | |||||||||
| WBInteraction000155813 | |||||||||
| WBInteraction000192957 | |||||||||
| WBInteraction000324430 | |||||||||
| WBInteraction000327732 | |||||||||
| WBInteraction000351386 | |||||||||
| WBInteraction000358457 | |||||||||
| WBInteraction000360630 | |||||||||
| WBInteraction000375159 | |||||||||
| WBInteraction000422972 | |||||||||
| WBInteraction000440617 | |||||||||
| WBInteraction000450745 | |||||||||
| WBInteraction000505779 | |||||||||
| WBInteraction000505782 | |||||||||
| WBInteraction000505783 | |||||||||
| WBInteraction000505784 | |||||||||
| WBInteraction000505785 | |||||||||
| WBInteraction000505786 | |||||||||
| WBInteraction000511545 | |||||||||
| WBInteraction000511546 | |||||||||
| WBInteraction000511547 | |||||||||
| WBInteraction000511548 | |||||||||
| WBInteraction000545936 | |||||||||
| WBInteraction000545946 | |||||||||
| WBInteraction000545962 | |||||||||
| WBInteraction000545979 | |||||||||
| WBInteraction000545990 | |||||||||
| WBInteraction000545994 | |||||||||
| WBInteraction000545997 | |||||||||
| WBInteraction000546002 | |||||||||
| WBInteraction000546039 | |||||||||
| WBInteraction000546084 | |||||||||
| WBInteraction000546135 | |||||||||
| WBInteraction000546139 | |||||||||
| WBInteraction000546187 | |||||||||
| WBInteraction000546210 | |||||||||
| WBInteraction000546246 | |||||||||
| WBInteraction000546264 | |||||||||
| WBInteraction000546354 | |||||||||
| WBInteraction000546400 | |||||||||
| WBInteraction000546563 | |||||||||
| WBInteraction000546871 | |||||||||
| WBInteraction000546917 | |||||||||
| WBInteraction000560602 | |||||||||
| WBInteraction000563184 | |||||||||
| WBInteraction000567567 | |||||||||
| WBInteraction000578016 | |||||||||
| WBInteraction000580888 | |||||||||
| Map_info | Map | II | Position | -4.75524 | |||||
| Positive | Positive_clone | B0286 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063700 | |||||||||
| WBPaper00064370 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Previously in the pacs gene class | |||||||||
| [200225 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-4.76524 ) | |||||||||
| Method | Gene |
