WormBase Tree Display for Gene: WBGene00015008
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| WBGene00015008 | SMap | S_parent | Sequence | B0041 | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | lmd | |||||
| Allele (21) | ||||||
| RNASeq_FPKM (74) | ||||||
| Ortholog (32) | ||||||
| Paralog | WBGene00009665 | Caenorhabditis elegans | From_analysis | Panther | ||
| Structured_description | Automated_description | Enriched in body wall musculature; intestine; neurons; and retrovesicular ganglion based on microarray and RNA-seq studies. Is affected by several genes including daf-12; sir-2.1; and clk-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including Doxycycline; Ketamine; and Quercetin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: LysM domain superfamily; LysM domain; and LysM and putative peptidoglycan-binding domain-containing protein 1-4. Is an ortholog of human LYSMD1 (LysM domain containing 1) and LYSMD2 (LysM domain containing 2). | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | B0041.3 | ||||
| Corresponding_CDS_history | B0041.3:wp252 | |||||
| Corresponding_transcript | B0041.3.1 | |||||
| Other_sequence | MI01003 | |||||
| CV199347.1 | ||||||
| Associated_feature | WBsf643226 | |||||
| WBsf983455 | ||||||
| WBsf217555 | ||||||
| Experimental_info (7) | ||||||
| Map_info | Map | I | Position | -1.03468 | ||
| Positive | Positive_clone | B0041 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00031295 | |||||
| WBPaper00038491 | ||||||
| WBPaper00055090 | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
