WormBase Tree Display for Gene: WBGene00014965
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WBGene00014965 | SMap | S_parent | Sequence | Y106G6D | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | Y106G6D.5 | |||||
Molecular_name | Y106G6D.5a | ||||||
Y106G6D.5a.1 | |||||||
CE50264 | |||||||
Y106G6D.5b | |||||||
CE50220 | |||||||
Y106G6D.5b.1 | |||||||
Y106G6D.5c | |||||||
Y106G6D.5d | |||||||
Other_name | CELE_Y106G6D.5 | Accession_evidence | NDB | BX284601 | |||
Public_name | Y106G6D.5 | ||||||
DB_info | Database | WormQTL | gene | WBGene00014965 | |||
NDB | locus_tag | CELE_Y106G6D.5 | |||||
Panther | gene | CAEEL|WormBase=Y106G6D.5a|UniProtKB=A0A0K2WNK1 | |||||
family | PTHR10887 | ||||||
NCBI | gene | 13181740 | |||||
RefSeq | protein | NR_132563.1 | |||||
NM_001383712.1 | |||||||
NM_001313461.3 | |||||||
NR_132564.1 | |||||||
TrEMBL | UniProtAcc | A0A0K2WNK1 | |||||
A0A0K2WN06 | |||||||
UniProt_GCRP | UniProtAcc | A0A0K2WNK1 | |||||
OMIM | gene | 600502 | |||||
RNAcentral | URSid | URS000083AAAE | |||||
URS00008454B6 | |||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (46) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00000560 | ||||||
00000561 | |||||||
00000562 | |||||||
00000563 | |||||||
00000564 | |||||||
00000565 | |||||||
00000566 | |||||||
00000567 | |||||||
00120999 | |||||||
Ortholog (36) | |||||||
Paralog | WBGene00001016 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00001258 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00004880 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00007329 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00008099 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00010989 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00014208 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00016565 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00016566 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable RNA binding activity and transcription termination site sequence-specific DNA binding activity. Predicted to be involved in termination of RNA polymerase II transcription. Predicted to be located in nuclear body. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease axonal type 2S and distal spinal muscular atrophy 1. Is an ortholog of human IGHMBP2 (immunoglobulin mu DNA binding protein 2). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0111064 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5542) | ||
DOID:0110171 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5542) | ||||
Molecular_info (6) | |||||||
Experimental_info | RNAi_result | WBRNAi00117028 | Inferred_automatically | RNAi_primary | |||
WBRNAi00055254 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002235 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004497 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004496 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr2006987 | ||||||
Expr2025209 | |||||||
Microarray_results (14) | |||||||
Expression_cluster (76) | |||||||
Map_info | Positive | Positive_clone | Y106G6D | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | I | 4.65979 | |||||
Reference | WBPaper00055090 | ||||||
WBPaper00064339 | |||||||
Method | Gene |