WormBase Tree Display for Gene: WBGene00014965

WBGene00014965 SMap: S_parent: Sequence: Y106G6D
  Identity: Version: 2
    Name: Sequence_name: Y106G6D.5
      Molecular_name: Y106G6D.5a
        Y106G6D.5a.1
        CE50264
        Y106G6D.5b
        CE50220
        Y106G6D.5b.1
        Y106G6D.5c
        Y106G6D.5d
      Other_name: CELE_Y106G6D.5 Accession_evidence: NDB BX284601
      Public_name: Y106G6D.5
    DB_info: Database: WormQTL gene WBGene00014965
        NDB locus_tag CELE_Y106G6D.5
        Panther gene CAEEL|WormBase=Y106G6D.5a|UniProtKB=A0A0K2WNK1
          family PTHR10887
        NCBI gene 13181740
        RefSeq protein NR_132563.1
            NM_001383712.1
            NM_001313461.3
            NR_132564.1
        TrEMBL UniProtAcc A0A0K2WNK1
            A0A0K2WN06
        UniProt_GCRP UniProtAcc A0A0K2WNK1
        OMIM gene 600502
        RNAcentral URSid URS000083AAAE
            URS00008454B6
    Species: Caenorhabditis elegans
    History: Version_change: 1 27 May 2004 15:23:24 WBPerson1971 Event: Imported: Initial conversion from Pseudogene class of WS125
        2 18 Sep 2014 13:15:09 WBPerson1983 Event: Changed_class: Pseudogene CDS
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (46)
    RNASeq_FPKM (74)
    GO_annotation: 00000560
      00000561
      00000562
      00000563
      00000564
      00000565
      00000566
      00000567
      00120999
    Ortholog: WBGene00163862 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00193752 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00033194 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CBOVI.g10142 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g8028 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21616 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP29.g21453 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g5843 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8617 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7844 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g10348 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g17876 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g25702 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21015 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00030.g1751 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-Y106G6D.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g11647 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01967.g24135 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18851 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002309 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13127 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15391 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g15399 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10183900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1975 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00133588 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00062424 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00240861 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00305078 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258290 Strongyloides ratti From_analysis: WormBase-Compara
      SGD:S000001500 Saccharomyces cerevisiae From_analysis: Inparanoid
            OMA
            OrthoFinder
            SonicParanoid
      FB:FBgn0034187 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
      ZFIN:ZDB-GENE-050419-258 Danio rerio From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      HGNC:5542 Homo sapiens From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      MGI:99954 Mus musculus From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      RGD:68325 Rattus norvegicus From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
    Paralog: WBGene00001016 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001258 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004880 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007329 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008099 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010989 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00014208 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016565 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016566 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA binding activity and transcription termination site sequence-specific DNA binding activity. Predicted to be involved in termination of RNA polymerase II transcription. Predicted to be located in nuclear body. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease axonal type 2S and distal spinal muscular atrophy 1. Is an ortholog of human IGHMBP2 (immunoglobulin mu DNA binding protein 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0111064 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5542)
      DOID:0110171 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5542)
  Molecular_info: Corresponding_CDS: Y106G6D.5a
      Y106G6D.5b
    Corresponding_CDS_history: Y106G6D.5:wp101
    Corresponding_transcript: Y106G6D.5c
      Y106G6D.5d
      Y106G6D.5a.1
      Y106G6D.5b.1
    Corresponding_pseudogene_history: Y106G6D.5a:wp245
      Y106G6D.5b:wp245
    Other_sequence (29)
    Associated_feature: WBsf649549
      WBsf649550
      WBsf664838
      WBsf984918
      WBsf1010490
  Experimental_info: RNAi_result: WBRNAi00117028 Inferred_automatically: RNAi_primary
      WBRNAi00055254 Inferred_automatically: RNAi_primary
      WBRNAi00002235 Inferred_automatically: RNAi_primary
      WBRNAi00004497 Inferred_automatically: RNAi_primary
      WBRNAi00004496 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2006987
      Expr2025209
    Microarray_results (14)
    Expression_cluster (76)
  Map_info: Positive: Positive_clone: Y106G6D Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 4.65979
  Reference: WBPaper00055090
    WBPaper00064339
  Method: Gene