WormBase Tree Display for Gene: WBGene00014234
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WBGene00014234 | SMap | S_parent | Sequence | ZK1128 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | vps-29 | Paper_evidence | WBPaper00027192 | |||||
Sequence_name | ZK1128.8 | ||||||||
Molecular_name | ZK1128.8a | ||||||||
ZK1128.8a.1 | |||||||||
CE34140 | |||||||||
ZK1128.8b | |||||||||
CE34141 | |||||||||
ZK1128.8b.1 | |||||||||
Other_name | CELE_ZK1128.8 | Accession_evidence | NDB | BX284603 | |||||
Public_name | vps-29 | ||||||||
DB_info | Database | AceView | gene | 3L202 | |||||
WormQTL | gene | WBGene00014234 | |||||||
WormFlux | gene | WBGene00014234 | |||||||
NDB | locus_tag | CELE_ZK1128.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00014234|UniProtKB=Q86D99 | |||||||
family | PTHR11124 | ||||||||
NCBI | gene | 176424 | |||||||
RefSeq | protein | NM_001027816.4 | |||||||
NM_001027817.4 | |||||||||
TREEFAM | TREEFAM_ID | TF300880 | |||||||
TrEMBL | UniProtAcc | Q86D99 | |||||||
Q9XVX5 | |||||||||
UniProt_GCRP | UniProtAcc | Q86D99 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 May 2006 09:18:16 | WBPerson2970 | Name_change | CGC_name | vps-29 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | vps | ||||||||
Allele (18) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00083153 | ||||||||
00083154 | |||||||||
00083155 | |||||||||
00083156 | |||||||||
00083157 | |||||||||
00083158 | |||||||||
00083159 | |||||||||
00083160 | |||||||||
00105906 | |||||||||
Contained_in_operon | CEOP3656 | ||||||||
Ortholog (33) | |||||||||
Structured_description | Automated_description | Predicted to be involved in intracellular protein transport and retrograde transport, endosome to Golgi. Located in cytosol. Is an ortholog of human VPS29 (VPS29 retromer complex component). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK1128.8a | |||||||
ZK1128.8b | |||||||||
Corresponding_CDS_history | ZK1128.8:wp100 | ||||||||
Corresponding_transcript | ZK1128.8a.1 | ||||||||
ZK1128.8b.1 | |||||||||
Other_sequence (48) | |||||||||
Associated_feature | WBsf667368 | ||||||||
WBsf227413 | |||||||||
WBsf227414 | |||||||||
Experimental_info | RNAi_result | WBRNAi00059145 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038167 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00097727 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00097728 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00002109 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021826 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00097731 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006777 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062483 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00099093 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr8902 | ||||||||
Expr1022488 | |||||||||
Expr1036383 | |||||||||
Expr1162569 | |||||||||
Expr2018019 | |||||||||
Expr2036156 | |||||||||
Drives_construct | WBCnstr00005934 | ||||||||
WBCnstr00013596 | |||||||||
WBCnstr00029206 | |||||||||
Construct_product | WBCnstr00005934 | ||||||||
WBCnstr00013596 | |||||||||
WBCnstr00029206 | |||||||||
Microarray_results (22) | |||||||||
Expression_cluster (90) | |||||||||
Interaction (88) | |||||||||
Map_info | Map | III | Position | 1.83284 | Error | 0.001298 | |||
Positive | Positive_clone | ZK1128 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (13) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |