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WormBase Tree Display for Gene: WBGene00014222

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Name Class

WBGene00014222SMapS_parentSequenceZK1098
IdentityVersion2
NameCGC_nametrpp-3Person_evidenceWBPerson3188
Sequence_nameZK1098.5
Molecular_nameZK1098.5
ZK1098.5.1
CE00368
Other_nameCELE_ZK1098.5Accession_evidenceNDBBX284603
Public_nametrpp-3
DB_infoDatabaseAceViewgene3K615
WormQTLgeneWBGene00014222
WormFluxgeneWBGene00014222
NDBlocus_tagCELE_ZK1098.5
PanthergeneCAEEL|WormBase=WBGene00014222|UniProtKB=P34605
familyPTHR13048
NCBIgene176344
RefSeqproteinNM_066699.7
SwissProtUniProtAccP34605
TREEFAMTREEFAM_IDTF300091
UniProt_GCRPUniProtAccP34605
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
208 Aug 2013 16:41:57WBPerson2970Name_changeCGC_nametrpp-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtrpp
Allele (21)
StrainWBStrain00051448
RNASeq_FPKM (74)
GO_annotation (18)
Contained_in_operonCEOP3596
Ortholog (37)
Structured_descriptionAutomated_descriptionInvolved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle and protein secretion. Predicted to be located in cis-Golgi network membrane and cytosol. Predicted to be part of TRAPP complex. Is an ortholog of human TRAPPC3 (trafficking protein particle complex subunit 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK1098.5
Corresponding_transcriptZK1098.5.1
Other_sequence (34)
Associated_featureWBsf659416
WBsf225587
Experimental_infoRNAi_resultWBRNAi00059113Inferred_automaticallyRNAi_primary
WBRNAi00059112Inferred_automaticallyRNAi_primary
WBRNAi00059111Inferred_automaticallyRNAi_primary
WBRNAi00082858Inferred_automaticallyRNAi_primary
WBRNAi00085570Inferred_automaticallyRNAi_primary
WBRNAi00038148Inferred_automaticallyRNAi_primary
WBRNAi00002785Inferred_automaticallyRNAi_primary
WBRNAi00002662Inferred_automaticallyRNAi_primary
WBRNAi00061602Inferred_automaticallyRNAi_primary
WBRNAi00021807Inferred_automaticallyRNAi_primary
Expr_patternExpr1024760
Expr1036375
Expr1162538
Expr2017510
Expr2035649
Drives_constructWBCnstr00029214
Construct_productWBCnstr00029214
Microarray_results (20)
Expression_cluster (84)
InteractionWBInteraction000009427
WBInteraction000030417
WBInteraction000032245
WBInteraction000032434
WBInteraction000039135
WBInteraction000039136
WBInteraction000039137
WBInteraction000043912
WBInteraction000046308
WBInteraction000047178
WBInteraction000047179
WBInteraction000047180
WBInteraction000105541
WBInteraction000105706
WBInteraction000105776
WBInteraction000126017
WBInteraction000144178
WBInteraction000149093
WBInteraction000178413
WBInteraction000194726
WBInteraction000194727
WBInteraction000205439
WBInteraction000207220
WBInteraction000209165
WBInteraction000215152
WBInteraction000223955
WBInteraction000225464
WBInteraction000226310
WBInteraction000226449
WBInteraction000229890
WBInteraction000231170
WBInteraction000235461
WBInteraction000238414
WBInteraction000379911
WBInteraction000384122
WBInteraction000384684
WBInteraction000396499
WBInteraction000401063
WBInteraction000405570
WBInteraction000405571
WBInteraction000407413
WBInteraction000463498
WBInteraction000466474
WBInteraction000507569
WBInteraction000507570
WBInteraction000507571
WBInteraction000507572
WBInteraction000507573
WBInteraction000507574
WBInteraction000507575
WBInteraction000507576
WBInteraction000507577
WBInteraction000507578
WBInteraction000507579
WBInteraction000514188
WBInteraction000514189
WBInteraction000517157
WBInteraction000517158
WBInteraction000517159
WBInteraction000517160
WBInteraction000517161
WBInteraction000517162
WBInteraction000517163
WBInteraction000517164
WBInteraction000517165
WBInteraction000517166
WBInteraction000517167
WBInteraction000517168
WBInteraction000517169
WBInteraction000517170
WBInteraction000517171
WBInteraction000517172
WBInteraction000517173
WBInteraction000517174
WBInteraction000517175
WBInteraction000517176
WBInteraction000517177
WBInteraction000517178
WBInteraction000517179
WBInteraction000517180
WBInteraction000517181
WBInteraction000517182
WBInteraction000517183
WBInteraction000517184
WBInteraction000517185
WBInteraction000517186
WBInteraction000517187
WBInteraction000517188
WBInteraction000517189
WBInteraction000517190
WBInteraction000517191
WBInteraction000517192
WBInteraction000517193
WBInteraction000517194
WBInteraction000517195
WBInteraction000517196
WBInteraction000517198
WBInteraction000517199
WBInteraction000517200
WBInteraction000517201
WBInteraction000517202
WBInteraction000517203
WBInteraction000517204
WBInteraction000517205
WBInteraction000517206
WBInteraction000517207
WBInteraction000523068
WBInteraction000523069
WBInteraction000548002
WBInteraction000548414
WBInteraction000560632
Map_infoMapIIIPosition0.577842
PositivePositive_cloneZK1098Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00005423
WBPaper00005747
WBPaper00027766
WBPaper00038491
WBPaper00055090
WBPaper00060970
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene