WormBase Tree Display for Gene: WBGene00014111
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| WBGene00014111 | SMap | S_parent | Sequence | ZK856 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rpc-25 | Person_evidence | WBPerson10054 | |||||
| Sequence_name | ZK856.10 | ||||||||
| Molecular_name | ZK856.10 | ||||||||
| ZK856.10.1 | |||||||||
| CE06667 | |||||||||
| Other_name | CELE_ZK856.10 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | rpc-25 | ||||||||
| DB_info | Database | AceView | gene | 5K686 | |||||
| WormQTL | gene | WBGene00014111 | |||||||
| WormFlux | gene | WBGene00014111 | |||||||
| NDB | locus_tag | CELE_ZK856.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00014111|UniProtKB=Q23645 | |||||||
| family | PTHR12709 | ||||||||
| NCBI | gene | 179418 | |||||||
| RefSeq | protein | NM_073224.5 | |||||||
| TREEFAM | TREEFAM_ID | TF103053 | |||||||
| TrEMBL | UniProtAcc | Q23645 | |||||||
| UniProt_GCRP | UniProtAcc | Q23645 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 Sep 2012 14:29:00 | WBPerson2970 | Name_change | CGC_name | rpc-25 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rpc | ||||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00079190 | ||||||||
| 00079191 | |||||||||
| 00079192 | |||||||||
| 00079193 | |||||||||
| 00079194 | |||||||||
| 00120839 | |||||||||
| 00120840 | |||||||||
| Contained_in_operon | CEOP5248 | ||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00017356 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00021845 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in transcription initiation at RNA polymerase III promoter. Predicted to be located in nucleus. Predicted to be part of RNA polymerase III complex. Is an ortholog of human POLR3H (RNA polymerase III subunit H). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK856.10 | |||||||
| Corresponding_transcript | ZK856.10.1 | ||||||||
| Other_sequence | JI176533.1 | ||||||||
| HC00969 | |||||||||
| Dviv_isotig10176 | |||||||||
| CBC11850_1 | |||||||||
| CRC12354_1 | |||||||||
| HCC05220_1 | |||||||||
| Oden_isotig21076 | |||||||||
| Tcir_isotig16828 | |||||||||
| Associated_feature | WBsf669291 | ||||||||
| WBsf234347 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Expr1013522 | ||||||||
| Expr1036320 | |||||||||
| Expr1163197 | |||||||||
| Expr2015432 | |||||||||
| Expr2033667 | |||||||||
| Drives_construct | WBCnstr00029300 | ||||||||
| Construct_product | WBCnstr00029300 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (74) | |||||||||
| Interaction (124) | |||||||||
| Map_info | Map | V | Position | 2.33157 | |||||
| Positive | Positive_clone | ZK856 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
