WormBase Tree Display for Gene: WBGene00014006

WBGene00014006 SMap: S_parent: Sequence: ZK596
  Identity: Version: 2
    Name: CGC_name: srlf-30 Person_evidence: WBPerson260
          Laboratory_evidence: OH
      Sequence_name: ZK596.1
      Molecular_name: ZK596.1
        ZK596.1.1
        CE06631
      Other_name: ZK596.1
        CELE_ZK596.1 Accession_evidence: NDB BX284604
      Public_name: srlf-30
    DB_info: Database: AceView gene 4L665
        WormQTL gene WBGene00014006
        WormFlux gene WBGene00014006
        NDB locus_tag CELE_ZK596.1
        Panther gene CAEEL|WormBase=WBGene00014006|UniProtKB=Q23545
          family PTHR21593
        NCBI gene 177982
        RefSeq protein NM_069625.7
        TREEFAM TREEFAM_ID TF316074
        TrEMBL UniProtAcc Q23545
        UniProt_GCRP UniProtAcc Q23545
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 03 Oct 2022 15:59:20 WBPerson21950 Name_change: CGC_name: srlf-30
                Other_name: ZK596.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srlf
    Allele (23)
    Strain: WBStrain00004725
    RNASeq_FPKM (74)
    Ortholog: WBGene00140504 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00115504 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00116971 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00028308 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062484 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00075338 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130729 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00191473 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00115577 Pristionchus pacificus From_analysis: OMA
      WBGene00117010 Pristionchus pacificus From_analysis: OMA
      CBOVI.g11266 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g16144 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12842 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6893 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7956 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16146 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g18284 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g18287 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g492 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1411 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00004.g362 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-ZK596.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7985 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00007.g513 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12868 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014011 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_40057110 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_40307600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11710 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (39)
    Structured_description: Automated_description: Expressed in g1AL; g1AR; g1P; g2L; and g2R. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK596.1
    Corresponding_transcript: ZK596.1.1
    Other_sequence (11)
    Associated_feature: WBsf646336
      WBsf229056
  Experimental_info: RNAi_result: WBRNAi00007272 Inferred_automatically: RNAi_primary
      WBRNAi00022074 Inferred_automatically: RNAi_primary
      WBRNAi00059532 Inferred_automatically: RNAi_primary
      WBRNAi00038351 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10171
      Expr1010988
      Expr1162949
      Expr2008881
      Expr2027114
    Drives_construct: WBCnstr00015502
      WBCnstr00029385
    Construct_product: WBCnstr00029385
    Microarray_results (19)
    Expression_cluster (246)
    Interaction (14)
  Map_info: Map: IV Position: 4.73261
    Positive: Positive_clone: ZK596 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026735
    WBPaper00041256
    WBPaper00065106
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene