WormBase Tree Display for Gene: WBGene00013997
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| WBGene00013997 | SMap | S_parent | Sequence | ZK550 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | eelo-2 | Person_evidence | WBPerson6609 | |||||
| WBPerson1816 | |||||||||
| Sequence_name | ZK550.3 | ||||||||
| Molecular_name | ZK550.3 | ||||||||
| ZK550.3.1 | |||||||||
| CE37464 | |||||||||
| Other_name | CELE_ZK550.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | eelo-2 | ||||||||
| DB_info | Database | AceView | gene | 4S197 | |||||
| WormQTL | gene | WBGene00013997 | |||||||
| WormFlux | gene | WBGene00013997 | |||||||
| NDB | locus_tag | CELE_ZK550.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013997|UniProtKB=O62512 | |||||||
| family | PTHR11804 | ||||||||
| NCBI | gene | 178501 | |||||||
| RefSeq | protein | NM_070658.8 | |||||||
| TREEFAM | TREEFAM_ID | TF351383 | |||||||
| TrEMBL | UniProtAcc | O62512 | |||||||
| UniProt_GCRP | UniProtAcc | O62512 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 05 May 2023 12:43:53 | WBPerson51134 | Name_change | CGC_name | eelo-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eelo | ||||||||
| Allele (104) | |||||||||
| Strain | WBStrain00037792 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP4600 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00013464 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity and metalloendopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of human THOP1 (thimet oligopeptidase 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK550.3 | |||||||
| Corresponding_CDS_history | ZK550.3:wp99 | ||||||||
| ZK550.3:wp131 | |||||||||
| Corresponding_transcript | ZK550.3.1 | ||||||||
| Other_sequence (47) | |||||||||
| Associated_feature | WBsf646601 | ||||||||
| WBsf660979 | |||||||||
| WBsf229619 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059513 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001542 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038337 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021244 | ||||||||
| Expr1036255 | |||||||||
| Expr1162930 | |||||||||
| Expr2008873 | |||||||||
| Expr2027106 | |||||||||
| Microarray_results | SMD_ZK550.3 | ||||||||
| 179416_at | |||||||||
| A_12_P100777 | |||||||||
| Aff_ZK550.3 | |||||||||
| GPL13394_WBGene00013997 | |||||||||
| GPL13914_ZK550.3 | |||||||||
| GPL14144_ZK550.3_1953-2012_0.917_4_C | |||||||||
| GPL14144_ZK550.3_2045-2104_0.918_3_B | |||||||||
| GPL14144_ZK550.3_2140-2199_0.960_1_A | |||||||||
| GPL19516_CGZ0057034 | |||||||||
| GPL21109_ZK550.3 | |||||||||
| GPL3518_CE16734 | |||||||||
| GPL8304_CE_WBGene00013997_A | |||||||||
| GPL8304_CE_WBGene00013997_B | |||||||||
| GPL8673_ZK550_3P00838 | |||||||||
| GPL8673_ZK550_3P01364 | |||||||||
| GPL8673_ZK550_3P01762 | |||||||||
| GPL9450_ZK550.3 | |||||||||
| cea2.p.105809 | |||||||||
| Expression_cluster (109) | |||||||||
| Interaction (90) | |||||||||
| Map_info | Map | IV | Position | 16.2839 | |||||
| Positive | Positive_clone | ZK550 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034598 | ||||||||
| WBPaper00036249 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
