WormBase Tree Display for Gene: WBGene00013958
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| WBGene00013958 | SMap | S_parent | Sequence | ZK265 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nol-16 | Person_evidence | WBPerson3772 | |||||
| WBPerson38007 | |||||||||
| Sequence_name | ZK265.6 | ||||||||
| Molecular_name | ZK265.6 | ||||||||
| ZK265.6.1 | |||||||||
| CE15299 | |||||||||
| Other_name | NOP16 | ||||||||
| CELE_ZK265.6 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | nol-16 | ||||||||
| DB_info | Database | AceView | gene | 1I831 | |||||
| WormQTL | gene | WBGene00013958 | |||||||
| WormFlux | gene | WBGene00013958 | |||||||
| NDB | locus_tag | CELE_ZK265.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013958|UniProtKB=Q94402 | |||||||
| family | PTHR13243 | ||||||||
| NCBI | gene | 191277 | |||||||
| RefSeq | protein | NM_059847.6 | |||||||
| SwissProt | UniProtAcc | Q94402 | |||||||
| TREEFAM | TREEFAM_ID | TF323541 | |||||||
| UniProt_GCRP | UniProtAcc | Q94402 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Aug 2017 12:58:54 | WBPerson2970 | Name_change | CGC_name | nol-16 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nol | ||||||||
| Allele (21) | |||||||||
| Strain | WBStrain00047583 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00087707 | ||||||||
| 00087708 | |||||||||
| 00087709 | |||||||||
| 00087710 | |||||||||
| 00087711 | |||||||||
| 00087712 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in ribosomal large subunit biogenesis. Located in nucleolus. Is an ortholog of human NOP16 (NOP16 nucleolar protein). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK265.6 | |||||||
| Corresponding_transcript | ZK265.6.1 | ||||||||
| Other_sequence | TS01434 | ||||||||
| HC07586 | |||||||||
| CR04163 | |||||||||
| CJC01311_1 | |||||||||
| CRC06447_1 | |||||||||
| TSC05389_1 | |||||||||
| CBC07365_1 | |||||||||
| Dviv_isotig27885 | |||||||||
| CJC06787_1 | |||||||||
| Associated_feature | WBsf643516 | ||||||||
| WBsf656615 | |||||||||
| WBsf984385 | |||||||||
| WBsf1010206 | |||||||||
| WBsf218135 | |||||||||
| WBsf218136 | |||||||||
| Experimental_info | RNAi_result (19) | ||||||||
| Expr_pattern | Expr9476 | ||||||||
| Expr1020946 | |||||||||
| Expr1036239 | |||||||||
| Expr1162748 | |||||||||
| Expr2008804 | |||||||||
| Expr2027038 | |||||||||
| Drives_construct | WBCnstr00029414 | ||||||||
| Construct_product | WBCnstr00014041 | ||||||||
| WBCnstr00029414 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (142) | |||||||||
| Interaction (57) | |||||||||
| Map_info | Map | I | Position | 2.70349 | |||||
| Positive | Positive_clone | ZK265 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038444 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
