WormBase Tree Display for Gene: WBGene00013928
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| WBGene00013928 | SMap | S_parent | Sequence | ZK39 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-94 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | ZK39.3 | ||||||||
| Molecular_name | ZK39.3 | ||||||||
| ZK39.3.1 | |||||||||
| CE19314 | |||||||||
| Other_name | CELE_ZK39.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | clec-94 | ||||||||
| DB_info | Database | AceView | gene | 1L739 | |||||
| WormQTL | gene | WBGene00013928 | |||||||
| WormFlux | gene | WBGene00013928 | |||||||
| NDB | locus_tag | CELE_ZK39.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013928|UniProtKB=Q9XUI1 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 173009 | |||||||
| RefSeq | protein | NM_060466.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | Q9XUI1 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUI1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-94 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (126) | |||||||||
| Structured_description | Automated_description | Enriched in AVK based on RNA-seq studies. Is affected by several genes including rrf-3; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by six chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK39.3 | |||||||
| Corresponding_transcript | ZK39.3.1 | ||||||||
| Other_sequence | CRC04134_1 | ||||||||
| CBC03637_1 | |||||||||
| CBC16008_1 | |||||||||
| CR05696 | |||||||||
| CJC17304_1 | |||||||||
| Associated_feature | WBsf985211 | ||||||||
| WBsf1010665 | |||||||||
| WBsf218513 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004931 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001365 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038283 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059401 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112638 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014108 | ||||||||
| Expr1162829 | |||||||||
| Expr2028466 | |||||||||
| Drives_construct | WBCnstr00029437 | ||||||||
| Construct_product | WBCnstr00029437 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (71) | |||||||||
| Interaction (64) | |||||||||
| Map_info | Map | I | Position | 6.78223 | Error | 0.036174 | |||
| Positive | Positive_clone | ZK39 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
