WormBase Tree Display for Gene: WBGene00013911
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WBGene00013911 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | irld-60 | Person_evidence | WBPerson260 | |||||
Sequence_name | ZC482.2 | ||||||||
Molecular_name | ZC482.2 | ||||||||
ZC482.2.1 | |||||||||
CE47797 | |||||||||
Other_name | CELE_ZC482.2 | Accession_evidence | NDB | BX284603 | |||||
Public_name | irld-60 | ||||||||
DB_info | Database | AceView | gene | 3N834 | |||||
WormQTL | gene | WBGene00013911 | |||||||
WormFlux | gene | WBGene00013911 | |||||||
NDB | locus_tag | CELE_ZC482.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013911|UniProtKB=G5EED3 | |||||||
family | PTHR21662 | ||||||||
NCBI | gene | 191184 | |||||||
RefSeq | protein | NM_067255.3 | |||||||
TREEFAM | TREEFAM_ID | TF317243 | |||||||
TrEMBL | UniProtAcc | G5EED3 | |||||||
UniProt_GCRP | UniProtAcc | G5EED3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-60 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | irld | ||||||||
Allele (105) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (183) | |||||||||
Paralog (75) | |||||||||
Structured_description | Automated_description | Enriched in AFD; ASJ; and neurons based on tiling array; single-cell RNA-seq; RNA-seq; and microarray studies. Is affected by several genes including eat-2; pgl-1; and csr-1 based on tiling array; RNA-seq; and microarray studies. Is affected by four chemicals including Psoralens; Sirolimus; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Receptor L domain; Receptor L-domain; and Receptor L-domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZC482.2 | |||||||
Corresponding_CDS_history | ZC482.2:wp34 | ||||||||
ZC482.2:wp233 | |||||||||
Corresponding_transcript | ZC482.2.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00019872 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00058965 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00055356 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006910 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1013331 | ||||||||
Expr1162399 | |||||||||
Expr2012859 | |||||||||
Expr2031093 | |||||||||
Microarray_results (12) | |||||||||
Expression_cluster (48) | |||||||||
Interaction | WBInteraction000585479 | ||||||||
Map_info | Map | III | Position | 18.3643 | |||||
Positive | Positive_clone | ZC482 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |