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WormBase Tree Display for Gene: WBGene00013872

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Name Class

WBGene00013872SMapS_parentSequenceZC374
IdentityVersion1
NameSequence_nameZC374.2
Molecular_nameZC374.2
ZC374.2.1
CE53645
Other_nameCELE_ZC374.2Accession_evidenceNDBBX284606
Public_nameZC374.2
DB_infoDatabaseAceViewgeneXK654
WormQTLgeneWBGene00013872
WormFluxgeneWBGene00013872
NDBlocus_tagCELE_ZC374.2
NCBIgene191148
RefSeqproteinNM_001375107.2
TrEMBLUniProtAccQ23266
UniProt_GCRPUniProtAccQ23266
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (183)
StrainWBStrain00037366
WBStrain00037523
WBStrain00037524
RNASeq_FPKM (74)
OrthologWBGene00025103Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00193615Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00128625Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00063145Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00105508Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00269356Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g11842Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13938Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g267Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17669Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20556Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25057Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12698Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9438Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g5700Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g15919Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00065.g3163Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-ZC374.2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13653Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02927.g28427Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01408Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023508Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07475Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g24128Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0063800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19836Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00246535Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00267874Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297116Trichuris murisFrom_analysisWormBase-Compara
WBGene00301123Trichuris murisFrom_analysisWormBase-Compara
Paralog (19)
Structured_descriptionAutomated_descriptionEnriched in intestine and muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on microarray; RNA-seq; and proteomic studies. Is affected by sixteen chemicals including methylmercuric chloride; rotenone; and sesamin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Fibronectin type III domain; Fibronectin type III; and Immunoglobulin-like fold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZC374.2
Corresponding_CDS_historyZC374.2:wp191
ZC374.2:wp272
Corresponding_transcriptZC374.2.1
Other_sequence (31)
Associated_featureWBsf654299
WBsf1006592
WBsf1006593
WBsf1023652
WBsf1023653
Experimental_infoRNAi_resultWBRNAi00058853Inferred_automaticallyRNAi_primary
WBRNAi00021659Inferred_automaticallyRNAi_primary
Expr_patternExpr1017139
Expr1036205
Expr1162297
Expr2008608
Expr2026844
Microarray_results (18)
Expression_cluster (159)
InteractionWBInteraction000202451
WBInteraction000210767
WBInteraction000214794
WBInteraction000271345
WBInteraction000335962
WBInteraction000347164
WBInteraction000439221
Map_infoPositivePositive_cloneZC374Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX1.73481
MethodGene