WormBase Tree Display for Gene: WBGene00013840
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WBGene00013840 | SMap | S_parent | Sequence | ZC47 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxa-151 | Person_evidence | WBPerson655 | |||||
Sequence_name | ZC47.7 | ||||||||
Molecular_name | ZC47.7 | ||||||||
ZC47.7.1 | |||||||||
CE15008 | |||||||||
Other_name | CELE_ZC47.7 | Accession_evidence | NDB | BX284603 | |||||
Public_name | fbxa-151 | ||||||||
DB_info | Database (10) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 01 Mar 2007 11:55:18 | WBPerson2970 | Name_change | CGC_name | fbxa-151 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxa | ||||||||
Allele (28) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00013998 | ||||||||
Ortholog | WBGene00034189 | Caenorhabditis briggsae | From_analysis | OMA | |||||
CSP28.g15362 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
chrIII_pilon.g6912 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
chrIII_pilon.g6914 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00065925 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Paralog (223) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Involved in innate immune response. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZC47.7 | |||||||
Corresponding_transcript | ZC47.7.1 | ||||||||
Associated_feature | WBsf991265 | ||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern | Expr1162389 | ||||||||
Drives_construct | WBCnstr00029511 | ||||||||
Construct_product | WBCnstr00029511 | ||||||||
Microarray_results | SMD_ZC47.1 | ||||||||
SMD_ZC47.7 | |||||||||
176212_at | |||||||||
Expression_cluster (90) | |||||||||
Interaction (40) | |||||||||
Map_info | Map | III | Position | -22.5736 | |||||
Positive | Positive_clone | ZC47 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00012854 | ||||||||
WBPaper00041771 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
[200225 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-22.5737) | |||||||||
[200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-22.5752) | |||||||||
Method | Gene |