WormBase Tree Display for Gene: WBGene00013834
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| WBGene00013834 | SMap | S_parent | Sequence | ZC15 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-261 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | ZC15.6 | ||||||||
| Molecular_name | ZC15.6 | ||||||||
| ZC15.6.1 | |||||||||
| CE16687 | |||||||||
| Other_name | CELE_ZC15.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-261 | ||||||||
| DB_info | Database | AceView | gene | 5U760 | |||||
| WormQTL | gene | WBGene00013834 | |||||||
| WormFlux | gene | WBGene00013834 | |||||||
| NDB | locus_tag | CELE_ZC15.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013834|UniProtKB=O18269 | |||||||
| family | PTHR47517 | ||||||||
| NCBI | gene | 180330 | |||||||
| RefSeq | protein | NM_075512.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | O18269 | |||||||
| UniProt_GCRP | UniProtAcc | O18269 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:28 | WBPerson2970 | Name_change | CGC_name | clec-261 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (166) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (126) | |||||||||
| Structured_description | Automated_description | Enriched in AVE; F cell; U cell; and neurons based on tiling array; single-cell RNA-seq; and RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and csr-1 based on tiling array; RNA-seq; and microarray studies. Is affected by metformin; Sirolimus; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZC15.6 | |||||||
| Corresponding_transcript | ZC15.6.1 | ||||||||
| Other_sequence (29) | |||||||||
| Associated_feature | WBsf1003503 | ||||||||
| WBsf1003504 | |||||||||
| WBsf1021928 | |||||||||
| WBsf1021929 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00021576 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001094 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037955 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112636 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058744 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028061 | ||||||||
| Expr1162165 | |||||||||
| Expr2010153 | |||||||||
| Expr2028397 | |||||||||
| Drives_construct | WBCnstr00029517 | ||||||||
| Construct_product | WBCnstr00029517 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (48) | |||||||||
| Interaction (65) | |||||||||
| Map_info | Map | V | Position | 24.9849 | Error | 0.000742 | |||
| Positive | Positive_clone | ZC15 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
