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WormBase Tree Display for Gene: WBGene00013765

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Name Class

WBGene00013765SMapS_parentSequenceY113G7B
IdentityVersion2
NameCGC_namecdkr-3Paper_evidenceWBPaper00042074
Sequence_nameY113G7B.16
Molecular_nameY113G7B.16
Y113G7B.16.1
CE23296
Other_nameCELE_Y113G7B.16Accession_evidenceNDBBX284605
Public_namecdkr-3
DB_infoDatabaseAceViewgene5U745
WormQTLgeneWBGene00013765
WormFluxgeneWBGene00013765
NDBlocus_tagCELE_Y113G7B.16
PanthergeneCAEEL|WormBase=WBGene00013765|UniProtKB=Q9U2Y2
familyPTHR14894
NCBIgene180327
RefSeqproteinNM_001383506.2
SwissProtUniProtAccQ9U2Y2
UniProt_GCRPUniProtAccQ9U2Y2
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
204 Jun 2013 14:47:04WBPerson2970Name_changeCGC_namecdkr-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcdkr
Allele (122)
StrainWBStrain00035272
RNASeq_FPKM (74)
GO_annotation00099721
00099722
00099723
00099724
00105614
00105722
Ortholog (34)
Structured_descriptionAutomated_descriptionInvolved in IRE1-mediated unfolded protein response. Expressed in neurons; pharynx; and spermatheca. Used to study early infantile epileptic encephalopathy. Is an ortholog of human CDK5RAP3 (CDK5 regulatory subunit associated protein 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:0050709Homo sapiensPaper_evidenceWBPaper00050013
Curator_confirmedWBPerson324
Date_last_updated27 Sep 2020 00:00:00
Models_disease_assertedWBDOannot00000816
Molecular_infoCorresponding_CDSY113G7B.16
Corresponding_transcriptY113G7B.16.1
Other_sequence (19)
Associated_feature (18)
Experimental_infoRNAi_resultWBRNAi00000255Inferred_automaticallyRNAi_primary
WBRNAi00055397Inferred_automaticallyRNAi_primary
WBRNAi00055398Inferred_automaticallyRNAi_primary
WBRNAi00036587Inferred_automaticallyRNAi_primary
Expr_patternChronogram374
Expr7705
Expr10624
Expr1018445
Expr1036167
Expr1158912
Expr2009818
Expr2028059
Drives_constructWBCnstr00001212
WBCnstr00012850
WBCnstr00017403
Microarray_results (27)
Expression_cluster (109)
InteractionWBInteraction000169077
WBInteraction000172945
WBInteraction000539169
WBInteraction000539594
WBInteraction000539595
WBInteraction000563241
WBInteraction000567704
WBInteraction000575337
Map_infoMapVPosition24.9809
PositivePositive_cloneY113G7BInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00049828
WBPaper00050013
WBPaper00055090
WBPaper00061547
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene