WormBase Tree Display for Gene: WBGene00013765
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WBGene00013765 | SMap | S_parent | Sequence | Y113G7B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | cdkr-3 | Paper_evidence | WBPaper00042074 | |||||
Sequence_name | Y113G7B.16 | ||||||||
Molecular_name | Y113G7B.16 | ||||||||
Y113G7B.16.1 | |||||||||
CE23296 | |||||||||
Other_name | CELE_Y113G7B.16 | Accession_evidence | NDB | BX284605 | |||||
Public_name | cdkr-3 | ||||||||
DB_info | Database | AceView | gene | 5U745 | |||||
WormQTL | gene | WBGene00013765 | |||||||
WormFlux | gene | WBGene00013765 | |||||||
NDB | locus_tag | CELE_Y113G7B.16 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013765|UniProtKB=Q9U2Y2 | |||||||
family | PTHR14894 | ||||||||
NCBI | gene | 180327 | |||||||
RefSeq | protein | NM_001383506.2 | |||||||
SwissProt | UniProtAcc | Q9U2Y2 | |||||||
UniProt_GCRP | UniProtAcc | Q9U2Y2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 04 Jun 2013 14:47:04 | WBPerson2970 | Name_change | CGC_name | cdkr-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cdkr | ||||||||
Allele (122) | |||||||||
Strain | WBStrain00035272 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00099721 | ||||||||
00099722 | |||||||||
00099723 | |||||||||
00099724 | |||||||||
00105614 | |||||||||
00105722 | |||||||||
Ortholog (34) | |||||||||
Structured_description | Automated_description | Involved in IRE1-mediated unfolded protein response. Expressed in neurons; pharynx; and spermatheca. Used to study early infantile epileptic encephalopathy. Is an ortholog of human CDK5RAP3 (CDK5 regulatory subunit associated protein 3). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Experimental_model | DOID:0050709 | Homo sapiens | Paper_evidence | WBPaper00050013 | ||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 27 Sep 2020 00:00:00 | ||||||||
Models_disease_asserted | WBDOannot00000816 | ||||||||
Molecular_info | Corresponding_CDS | Y113G7B.16 | |||||||
Corresponding_transcript | Y113G7B.16.1 | ||||||||
Other_sequence (19) | |||||||||
Associated_feature (18) | |||||||||
Experimental_info | RNAi_result | WBRNAi00000255 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00055397 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00055398 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00036587 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram374 | ||||||||
Expr7705 | |||||||||
Expr10624 | |||||||||
Expr1018445 | |||||||||
Expr1036167 | |||||||||
Expr1158912 | |||||||||
Expr2009818 | |||||||||
Expr2028059 | |||||||||
Drives_construct | WBCnstr00001212 | ||||||||
WBCnstr00012850 | |||||||||
WBCnstr00017403 | |||||||||
Microarray_results (27) | |||||||||
Expression_cluster (109) | |||||||||
Interaction | WBInteraction000169077 | ||||||||
WBInteraction000172945 | |||||||||
WBInteraction000539169 | |||||||||
WBInteraction000539594 | |||||||||
WBInteraction000539595 | |||||||||
WBInteraction000563241 | |||||||||
WBInteraction000567704 | |||||||||
WBInteraction000575337 | |||||||||
Map_info | Map | V | Position | 24.9809 | |||||
Positive | Positive_clone | Y113G7B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00049828 | |||||||||
WBPaper00050013 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00061547 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |