WormBase Tree Display for Gene: WBGene00013754
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WBGene00013754 | SMap | S_parent | Sequence | Y113G7B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxa-116 | Person_evidence | WBPerson655 | |||||
Sequence_name | Y113G7B.1 | ||||||||
Molecular_name | Y113G7B.1a | ||||||||
Y113G7B.1a.1 | |||||||||
CE35646 | |||||||||
Y113G7B.1b | |||||||||
CE23284 | |||||||||
Y113G7B.1b.1 | |||||||||
Other_name | CELE_Y113G7B.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | fbxa-116 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00013754 | |||||
WormFlux | gene | WBGene00013754 | |||||||
NDB | locus_tag | CELE_Y113G7B.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013754|UniProtKB=Q2YS44 | |||||||
family | PTHR23015 | ||||||||
NCBI | gene | 190968 | |||||||
RefSeq | protein | NM_001047720.2 | |||||||
NM_001047719.1 | |||||||||
TREEFAM | TREEFAM_ID | TF322006 | |||||||
TrEMBL | UniProtAcc | Q9U2Y1 | |||||||
Q2YS44 | |||||||||
UniProt_GCRP | UniProtAcc | Q2YS44 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-116 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxa | ||||||||
Allele (80) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00080505 | ||||||||
Ortholog (11) | |||||||||
Paralog (223) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Involved in innate immune response. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (3) | |||||||||
Experimental_info | RNAi_result | WBRNAi00019891 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036583 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00055391 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102084 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr11710 | ||||||||
Expr1012272 | |||||||||
Expr1158907 | |||||||||
Expr2011462 | |||||||||
Expr2029700 | |||||||||
Drives_construct | WBCnstr00029533 | ||||||||
Construct_product | WBCnstr00029533 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (99) | |||||||||
Interaction | WBInteraction000400749 | ||||||||
WBInteraction000542944 | |||||||||
WBInteraction000547153 | |||||||||
WBInteraction000548107 | |||||||||
WBInteraction000548596 | |||||||||
Map_info | Map | V | Position | 24.8783 | Error | 0.003753 | |||
Positive | Positive_clone | Y113G7B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00012854 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |