WormBase Tree Display for Gene: WBGene00013747
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WBGene00013747 | SMap | S_parent | Sequence | Y113G7A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | spe-19 | Person_evidence | WBPerson252 | |||||
Sequence_name | Y113G7A.10 | ||||||||
Molecular_name | Y113G7A.10 | ||||||||
Y113G7A.10.1 | |||||||||
CE40399 | |||||||||
Other_name | CELE_Y113G7A.10 | Accession_evidence | NDB | BX284605 | |||||
Public_name | spe-19 | ||||||||
DB_info | Database | AceView | gene | 5U510 | |||||
WormQTL | gene | WBGene00013747 | |||||||
WormFlux | gene | WBGene00013747 | |||||||
NDB | locus_tag | CELE_Y113G7A.10 | |||||||
NCBI | gene | 190958 | |||||||
RefSeq | protein | NM_075470.5 | |||||||
TrEMBL | UniProtAcc | Q9U2Y6 | |||||||
UniProt_GCRP | UniProtAcc | Q9U2Y6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 20 Jul 2005 12:21:08 | WBPerson2970 | Name_change | CGC_name | spe-19 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | spe | ||||||||
Allele (198) | |||||||||
Strain | WBStrain00037605 | ||||||||
WBStrain00000052 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00099726 | ||||||||
00099727 | |||||||||
Ortholog (17) | |||||||||
Structured_description | Concise_description | spe-19 is predicted to encode a novel single-pass transmembrane protein with no significant similarity to any other gene product; spe-19 is required for hermaphrodite spermiogenesis or sperm activation but not for male-derived sperm activation (sperm activation is the morphogenesis of a round non-motile spermatid to an amoeboid crawling sperm); however, spe-19 mutant hermaphrodite spermatids can transactivate to form functional sperm during mating with males; spe-19 is likely to be the receptor/co-receptor for the sperm activation signal; genetic and phenotypic evidence suggests that spe-19 acts in a common pathway with spe-8, spe-12, spe-27 and spe-29. | Paper_evidence | WBPaper00025244 | |||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 26 Jul 2010 00:00:00 | ||||||||
Automated_description | Involved in spermatid development. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y113G7A.10 | |||||||
Corresponding_CDS_history | Y113G7A.10:wp101 | ||||||||
Corresponding_transcript | Y113G7A.10.1 | ||||||||
Other_sequence | FG647849.1 | ||||||||
Associated_feature | WBsf1003417 | ||||||||
Experimental_info | RNAi_result | WBRNAi00055377 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00036575 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019886 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011349 | ||||||||
Expr1158893 | |||||||||
Expr2016035 | |||||||||
Expr2034269 | |||||||||
Construct_product | WBCnstr00022514 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (91) | |||||||||
Interaction (153) | |||||||||
Map_info | Map | V | Position | 24.4739 | Error | 0.009415 | |||
Positive | Positive_clone | Y113G7A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5371 | |||||||
4745 | |||||||||
Pseudo_map_position | |||||||||
Reference (21) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |