WormBase Tree Display for Gene: WBGene00013679
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| WBGene00013679 | SMap | S_parent | Sequence | Y105E8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y105E8A.21 | |||||||
| Molecular_name | Y105E8A.21a | ||||||||
| Y105E8A.21a.1 | |||||||||
| CE25162 | |||||||||
| Y105E8A.21b | |||||||||
| CE45756 | |||||||||
| Y105E8A.21b.1 | |||||||||
| Other_name | Y105E8E.x | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y105E8A.21 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | Y105E8A.21 | ||||||||
| DB_info | Database | AceView | gene | 1P92 | |||||
| WormQTL | gene | WBGene00013679 | |||||||
| WormFlux | gene | WBGene00013679 | |||||||
| NDB | locus_tag | CELE_Y105E8A.21 | |||||||
| NCBI | gene | 173313 | |||||||
| RefSeq | protein | NM_001265442.4 | |||||||
| NM_001265443.3 | |||||||||
| TrEMBL | UniProtAcc | E8MDW3 | |||||||
| Q9NEX6 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9NEX6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (250) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1736 | ||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Enriched in AFD; ASER; AVK; germ line; and germline precursor cell based on RNA-seq studies. Is affected by several genes including skn-1; dpy-10; and pmk-1 based on RNA-seq and microarray studies. Is affected by eight chemicals including D-glucose; Zidovudine; and allantoin based on RNA-seq; proteomic; and microarray studies. Is predicted to encode a protein with the following domains: WD40-repeat-containing domain superfamily and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y105E8A.21a | |||||||
| Y105E8A.21b | |||||||||
| Corresponding_transcript | Y105E8A.21a.1 | ||||||||
| Y105E8A.21b.1 | |||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf665128 | ||||||||
| WBsf665129 | |||||||||
| WBsf220622 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036508 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055225 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026653 | ||||||||
| Expr1036109 | |||||||||
| Expr1158758 | |||||||||
| Expr2006969 | |||||||||
| Expr2025191 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (84) | |||||||||
| Interaction | WBInteraction000546904 | ||||||||
| WBInteraction000582514 | |||||||||
| Map_info | Positive | Positive_clone | Y105E8A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 25.7582 | |||||||
| Method | Gene |
