WormBase Tree Display for Gene: WBGene00013599

WBGene00013599 SMap: S_parent: Sequence: Y87G2A
  Identity: Version: 2
    Name: CGC_name: eipr-1 Person_evidence: WBPerson9
      Sequence_name: Y87G2A.11
      Molecular_name: Y87G2A.11
        Y87G2A.11.1
        CE24682
      Other_name: CELE_Y87G2A.11 Accession_evidence: NDB BX284601
      Public_name: eipr-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 04 Jan 2016 15:29:00 WBPerson2970 Name_change: CGC_name: eipr-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: eipr
    Allele (124)
    RNASeq_FPKM (74)
    GO_annotation (13)
    Contained_in_operon: CEOP1712
      CEOP1708
    Ortholog: WBGene00038946 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00061169 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00141787 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00149349 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00132092 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00164673 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00193541 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00227436 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g12172 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5520 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g355 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8179 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21237 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g5859 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22304 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5415 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g19199 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9797 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7370 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00518.g11782 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-eipr-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20989 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03380.g29997 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_003601 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06721 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5293 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10013720 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2757 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248733 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00305075 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00262086 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00285187 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0036292 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-041010-167 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:12383 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1289332 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1305817 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Involved in positive regulation of dense core granule transport; positive regulation of egg-laying behavior; and positive regulation of locomotion involved in locomotory behavior. Predicted to be located in cytoplasm. Is an ortholog of human EIPR1 (EARP complex and GARP complex interacting protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y87G2A.11
    Corresponding_transcript: Y87G2A.11.1
    Other_sequence (15)
    Associated_feature: WBsf985902
      WBsf985903
      WBsf220522
      WBsf220523
  Experimental_info: RNAi_result: WBRNAi00058601 Inferred_automatically: RNAi_primary
      WBRNAi00037900 Inferred_automatically: RNAi_primary
      WBRNAi00004849 Inferred_automatically: RNAi_primary
      WBRNAi00061949 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021598
      Expr1036084
      Expr1162016
      Expr2011264
      Expr2029500
    Construct_product: WBCnstr00023005
      WBCnstr00023006
      WBCnstr00023007
      WBCnstr00023008
    Microarray_results (19)
    Expression_cluster (85)
    Interaction: WBInteraction000578755
  Map_info: Map: I Position: 21.5614
    Positive: Positive_clone: Y87G2A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00041771
    WBPaper00048038
    WBPaper00049619
    WBPaper00055090
    WBPaper00059006
    WBPaper00063151
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene