WormBase Tree Display for Gene: WBGene00013592
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WBGene00013592 | SMap | S_parent | Sequence | Y81G3A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y81G3A.4 | |||||||
Molecular_name | Y81G3A.4a | ||||||||
Y81G3A.4a.1 | |||||||||
CE44336 | |||||||||
Y81G3A.4b | |||||||||
CE44347 | |||||||||
Y81G3A.4b.1 | |||||||||
Other_name | CELE_Y81G3A.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | Y81G3A.4 | ||||||||
DB_info | Database | AceView | gene | 2N383 | |||||
WormQTL | gene | WBGene00013592 | |||||||
WormFlux | gene | WBGene00013592 | |||||||
NDB | locus_tag | CELE_Y81G3A.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013592|UniProtKB=D0Z5N5 | |||||||
family | PTHR36944 | ||||||||
NCBI | gene | 190748 | |||||||
RefSeq | protein | NM_001267443.3 | |||||||
NM_001267444.4 | |||||||||
TREEFAM | TREEFAM_ID | TF352800 | |||||||
TrEMBL | UniProtAcc | D0Z5N5 | |||||||
D0Z5N6 | |||||||||
UniProt_GCRP | UniProtAcc | D0Z5N5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (82) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (28) | |||||||||
Paralog | WBGene00008233 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00015167 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00016809 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in PLM; Z1; Z4; hypodermis; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercury hydroxide; Rifampin; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y81G3A.4a | |||||||
Y81G3A.4b | |||||||||
Corresponding_CDS_history | Y81G3A.4:wp210 | ||||||||
Corresponding_transcript (2) | |||||||||
Other_sequence | Tcir_isotig15615 | ||||||||
Associated_feature | WBsf644790 | ||||||||
WBsf644791 | |||||||||
WBsf658340 | |||||||||
WBsf658341 | |||||||||
WBsf222327 | |||||||||
Experimental_info | RNAi_result | WBRNAi00037897 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00094979 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058562 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021524 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1010891 | ||||||||
Expr1161969 | |||||||||
Expr2008464 | |||||||||
Expr2026705 | |||||||||
Drives_construct | WBCnstr00029588 | ||||||||
Construct_product | WBCnstr00029588 | ||||||||
Microarray_results (27) | |||||||||
Expression_cluster (148) | |||||||||
Interaction (35) | |||||||||
Map_info | Positive | Positive_clone | Y81G3A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 14.1596 | |||||||
Method | Gene |