WormBase Tree Display for Gene: WBGene00013592
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| WBGene00013592 | SMap | S_parent | Sequence | Y81G3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y81G3A.4 | |||||||
| Molecular_name | Y81G3A.4a | ||||||||
| Y81G3A.4a.1 | |||||||||
| CE44336 | |||||||||
| Y81G3A.4b | |||||||||
| CE44347 | |||||||||
| Y81G3A.4b.1 | |||||||||
| Other_name | CELE_Y81G3A.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y81G3A.4 | ||||||||
| DB_info | Database | AceView | gene | 2N383 | |||||
| WormQTL | gene | WBGene00013592 | |||||||
| WormFlux | gene | WBGene00013592 | |||||||
| NDB | locus_tag | CELE_Y81G3A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013592|UniProtKB=D0Z5N5 | |||||||
| family | PTHR36944 | ||||||||
| NCBI | gene | 190748 | |||||||
| RefSeq | protein | NM_001267443.3 | |||||||
| NM_001267444.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF352800 | |||||||
| TrEMBL | UniProtAcc | D0Z5N5 | |||||||
| D0Z5N6 | |||||||||
| UniProt_GCRP | UniProtAcc | D0Z5N5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (82) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00008233 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00015167 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016809 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in PLM; Z1; Z4; hypodermis; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercury hydroxide; Rifampin; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y81G3A.4a | |||||||
| Y81G3A.4b | |||||||||
| Corresponding_CDS_history | Y81G3A.4:wp210 | ||||||||
| Corresponding_transcript | Y81G3A.4a.1 | ||||||||
| Y81G3A.4b.1 | |||||||||
| Other_sequence | Tcir_isotig15615 | ||||||||
| Associated_feature | WBsf644790 | ||||||||
| WBsf644791 | |||||||||
| WBsf658340 | |||||||||
| WBsf658341 | |||||||||
| WBsf222327 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037897 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00094979 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058562 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021524 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010891 | ||||||||
| Expr1161969 | |||||||||
| Expr2008464 | |||||||||
| Expr2026705 | |||||||||
| Drives_construct | WBCnstr00029588 | ||||||||
| Construct_product | WBCnstr00029588 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (148) | |||||||||
| Interaction | WBInteraction000224159 | ||||||||
| WBInteraction000239143 | |||||||||
| WBInteraction000253636 | |||||||||
| WBInteraction000271100 | |||||||||
| WBInteraction000282935 | |||||||||
| WBInteraction000288779 | |||||||||
| WBInteraction000294560 | |||||||||
| WBInteraction000296947 | |||||||||
| WBInteraction000301691 | |||||||||
| WBInteraction000304090 | |||||||||
| WBInteraction000305869 | |||||||||
| WBInteraction000310939 | |||||||||
| WBInteraction000311379 | |||||||||
| WBInteraction000312083 | |||||||||
| WBInteraction000323602 | |||||||||
| WBInteraction000324605 | |||||||||
| WBInteraction000324692 | |||||||||
| WBInteraction000334764 | |||||||||
| WBInteraction000342983 | |||||||||
| WBInteraction000353688 | |||||||||
| WBInteraction000372753 | |||||||||
| WBInteraction000375642 | |||||||||
| WBInteraction000390961 | |||||||||
| WBInteraction000396361 | |||||||||
| WBInteraction000411695 | |||||||||
| WBInteraction000426803 | |||||||||
| WBInteraction000434191 | |||||||||
| WBInteraction000436714 | |||||||||
| WBInteraction000436801 | |||||||||
| WBInteraction000440774 | |||||||||
| WBInteraction000443281 | |||||||||
| WBInteraction000453008 | |||||||||
| WBInteraction000460722 | |||||||||
| WBInteraction000521179 | |||||||||
| WBInteraction000548946 | |||||||||
| Map_info | Positive | Positive_clone | Y81G3A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 14.1596 | |||||||
| Method | Gene |
