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WormBase Tree Display for Gene: WBGene00013553

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Name Class

WBGene00013553SMapS_parentSequenceY75B8A
IdentityVersion1
NameSequence_nameY75B8A.18
Molecular_nameY75B8A.18a
Y75B8A.18a.1
CE42578
Y75B8A.18b
CE42563
Y75B8A.18b.1
Other_nameCELE_Y75B8A.18Accession_evidenceNDBBX284603
Public_nameY75B8A.18
DB_infoDatabaseAceViewgene3N316
WormQTLgeneWBGene00013553
WormFluxgeneWBGene00013553
NDBlocus_tagCELE_Y75B8A.18
NCBIgene190705
RefSeqproteinNM_067189.8
NM_001136372.3
TrEMBLUniProtAccB2FDA5
B2FDA6
UniProt_GCRPUniProtAccB2FDA5
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (23)
StrainWBStrain00036446
RNASeq_FPKM (74)
Contained_in_operonCEOP3756
OrthologWBGene00041476Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00149265Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00123232Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00083027Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
CSP26.g6652Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g6640Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1424Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g11738Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g1254Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g8906Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20751Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-Y75B8A.18Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14545Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_05360.g34853Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06521Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008353Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_30008700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g9156Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABalaaaala; GLR; ciliated neurons; germ line; and pharyngeal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including age-1; dpy-10; and hsf-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including hydrogen sulfide; rotenone; and mianserin based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY75B8A.18a
Y75B8A.18b
Corresponding_CDS_historyY75B8A.18:wp190
Corresponding_transcriptY75B8A.18a.1
Y75B8A.18b.1
Other_sequencePT04722
Associated_featureWBsf651530
WBsf651531
WBsf667509
WBsf227643
Experimental_infoRNAi_resultWBRNAi00006803Inferred_automaticallyRNAi_primary
WBRNAi00058446Inferred_automaticallyRNAi_primary
WBRNAi00021441Inferred_automaticallyRNAi_primary
WBRNAi00058447Inferred_automaticallyRNAi_primary
Expr_patternExpr1026523
Expr1036055
Expr1161863
Expr2008411
Expr2026652
Microarray_results (19)
Expression_cluster (168)
InteractionWBInteraction000223347
WBInteraction000382552
WBInteraction000424525
WBInteraction000448871
Map_infoPositivePositive_cloneY75B8AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII16.1452
MethodGene