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WormBase Tree Display for Gene: WBGene00013540

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Name Class

WBGene00013540SMapS_parentSequenceY75B8A
IdentityVersion2
NameCGC_namecest-12Person_evidenceWBPerson36909
WBPerson7188
Sequence_nameY75B8A.3
Molecular_nameY75B8A.3
Y75B8A.3.1
CE47993
Other_nameCELE_Y75B8A.3Accession_evidenceNDBBX284603
Public_namecest-12
DB_infoDatabaseAceViewgene3N192
WormQTLgeneWBGene00013540
WormFluxgeneWBGene00013540
NDBlocus_tagCELE_Y75B8A.3
PanthergeneCAEEL|WormBase=WBGene00013540|UniProtKB=Q9XW75
familyPTHR11559
NCBIgene176642
RefSeqproteinNM_067175.6
TREEFAMTREEFAM_IDTF316715
TrEMBLUniProtAccQ9XW75
UniProt_GCRPUniProtAccQ9XW75
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
220 May 2019 14:10:26WBPerson1983Name_changeCGC_namecest-12
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcest
Allele (101)
RNASeq_FPKM (74)
OrthologWBGene00041463Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00061889Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00152090Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00136131Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00109501Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00159688Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g5571Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6596Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11564Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g6658Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1446Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g23755Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1270Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2272Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10196Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g15646Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g16419Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g24690Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25437Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20758Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00248.g7856Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_20543.g26480Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-Y75B8A.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14517Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01948.g24017Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06502Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008336Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08315Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08317Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_30011400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g9141Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00212019Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214391Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217111Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00304956Pristionchus pacificusFrom_analysisWormBase-Compara
Paralog (40)
Structured_descriptionAutomated_descriptionEnriched in Psub1; alimentary muscle; pharynx; and rectal muscle based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including Ethanol; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Alpha/Beta hydrolase fold; Carboxylesterase, type B; Phosphorylation site; and Carboxylesterase family.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY75B8A.3
Corresponding_CDS_historyY75B8A.3:wp85
Y75B8A.3:wp227
Y75B8A.3:wp229
Y75B8A.3:wp234
Corresponding_transcriptY75B8A.3.1
Other_sequenceJI169095.1
Associated_featureWBsf994573
WBsf994574
WBsf994575
WBsf994576
WBsf994577
WBsf1016146
WBsf1016147
WBsf1016148
WBsf1016149
Experimental_infoRNAi_resultWBRNAi00058461Inferred_automaticallyRNAi_primary
WBRNAi00001153Inferred_automaticallyRNAi_primary
WBRNAi00006834Inferred_automaticallyRNAi_primary
WBRNAi00021448Inferred_automaticallyRNAi_primary
WBRNAi00037846Inferred_automaticallyRNAi_primary
Expr_patternExpr1028233
Expr1036045
Expr1161876
Expr2008422
Expr2026663
Drives_constructWBCnstr00029603
Construct_productWBCnstr00029603
Microarray_results (18)
Expression_cluster (155)
InteractionWBInteraction000253165
WBInteraction000253205
WBInteraction000392245
WBInteraction000445377
WBInteraction000554798
Map_infoPositivePositive_cloneY75B8AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII14.8814
ReferenceWBPaper00065331
MethodGene