WormBase Tree Display for Gene: WBGene00013442
expand all nodes | collapse all nodes | view schema
| WBGene00013442 | SMap | S_parent | Sequence | Y66D12A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y66D12A.16 | |||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_Y66D12A.16 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y66D12A.16 | ||||||||
| DB_info | Database | AceView | gene | 3M615 | |||||
| WormQTL | gene | WBGene00013442 | |||||||
| WormFlux | gene | WBGene00013442 | |||||||
| NDB | locus_tag | CELE_Y66D12A.16 | |||||||
| NCBI | gene | 190499 | |||||||
| RefSeq | protein | NM_001312993.3 | |||||||
| NM_001312992.4 | |||||||||
| NM_001129264.4 | |||||||||
| NM_001129265.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF319058 | |||||||
| TrEMBL | UniProtAcc | A0A0K3AXA5 | |||||||
| A7DTF6 | |||||||||
| A0A0K3AUY4 | |||||||||
| A7DTF7 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AUY4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (57) | |||||||||
| Strain | WBStrain00031899 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3885 | ||||||||
| Ortholog | WBGene00063853 | Caenorhabditis remanei | From_analysis | TreeFam | |||||
| WBGene00138906 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| WBGene00163852 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00087280 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| chrIII_pilon.g9045 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00007762 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in AVJL; AVJR; germ line; germline precursor cell; and head mesodermal cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and elt-2 based on RNA-seq; tiling array; and microarray studies. Is affected by nine chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y66D12A.16a | |||||||
| Y66D12A.16b | |||||||||
| Y66D12A.16c | |||||||||
| Y66D12A.16d | |||||||||
| Corresponding_CDS_history | Y66D12A.16:wp133 | ||||||||
| Y66D12A.16:wp179 | |||||||||
| Corresponding_transcript | Y66D12A.16a.1 | ||||||||
| Y66D12A.16b.1 | |||||||||
| Y66D12A.16c.1 | |||||||||
| Y66D12A.16d.1 | |||||||||
| Other_sequence | GP00755 | ||||||||
| Associated_feature | WBsf994411 | ||||||||
| WBsf994412 | |||||||||
| WBsf1016022 | |||||||||
| WBsf1016023 | |||||||||
| WBsf225829 | |||||||||
| WBsf225830 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00075604 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057940 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015799 | ||||||||
| Expr1036008 | |||||||||
| Expr1161370 | |||||||||
| Expr2008179 | |||||||||
| Expr2026419 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (86) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Positive | Positive_clone | Y66D12A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 10.7602 | |||||||
| Reference | WBPaper00029006 | ||||||||
| WBPaper00037650 | |||||||||
| WBPaper00037671 | |||||||||
| Method | Gene |
