WormBase Tree Display for Gene: WBGene00013409

WBGene00013409 SMap: S_parent: Sequence: Y63D3A
  Identity: Version: 2
    Name: CGC_name: fbxb-56 Person_evidence: WBPerson655
      Sequence_name: Y63D3A.10
      Molecular_name: Y63D3A.10
        Y63D3A.10.1
        CE54014
      Other_name: CELE_Y63D3A.10 Accession_evidence: NDB BX284601
      Public_name: fbxb-56
    DB_info: Database: AceView gene 1O679
        WormQTL gene WBGene00013409
        WormFlux gene WBGene00013409
        NDB locus_tag CELE_Y63D3A.10
        Panther gene CAEEL|WormBase=WBGene00013409|UniProtKB=Q9XWG4
          family PTHR22899
        NCBI gene 173274
        RefSeq protein NM_001377677.2
        TrEMBL UniProtAcc Q9XWG4
        UniProt_GCRP UniProtAcc Q9XWG4
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-56
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (20)
    Strain: WBStrain00032444
    RNASeq_FPKM (74)
    Ortholog: chrI_pilon.g2850 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (142)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalaaaarl; excretory gland cell; interfacial epithelial cell; neurons; and rect_D based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and pie-1 based on microarray and RNA-seq studies. Is affected by four chemicals including multi-walled carbon nanotube; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y63D3A.10
    Corresponding_CDS_history: Y63D3A.10:wp274
    Corresponding_transcript: Y63D3A.10.1
    Associated_feature: WBsf643830
      WBsf657060
      WBsf657061
      WBsf657062
      WBsf986041
      WBsf986042
      WBsf1011180
      WBsf218771
  Experimental_info: RNAi_result: WBRNAi00057873 Inferred_automatically: RNAi_primary
      WBRNAi00004748 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022375
      Expr1035989
      Expr1161310
      Expr2011657
      Expr2029896
    Drives_construct: WBCnstr00029649
    Construct_product: WBCnstr00029649
    Microarray_results: SMD_Y63D3A.1
      184660_at
      Aff_Y63D3A.1
      GPL3518_CE20332
      GPL8673_Y63D3A_10P00130
      GPL8673_Y63D3A_10P00457
      GPL9450_Y63D3A.10
      cea2.i.06694
    Expression_cluster (99)
  Map_info: Map: I Position: 23.0734 Error: 0.006507
    Positive: Positive_clone: Y63D3A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene