WormBase Tree Display for Gene: WBGene00013380

WBGene00013380 SMap: S_parent: Sequence: Y62E10A
  Identity: Version: 2
    Name: CGC_name: memi-2 Paper_evidence: WBPaper00050213
          Person_evidence: WBPerson1480
      Sequence_name: Y62E10A.14
      Molecular_name: Y62E10A.14
        Y62E10A.14.1
        CE22704
      Other_name: CELE_Y62E10A.14 Accession_evidence: NDB BX284604
      Public_name: memi-2
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 14 Oct 2016 12:10:17 WBPerson2970 Name_change: CGC_name: memi-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: memi
    Allele (25)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP4607
    Ortholog: WBGene00055673 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00027716 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00157956 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00192068 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00214981 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g7116 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g6140 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21911 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1796 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7922 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13663 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21381 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16949 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g19713 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00279.g8390 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00585.g12502 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_III.g9485 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g7476 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_08604.g38852 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_09147.g39262 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13546 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010549 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_40335600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g12296 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00121784 Caenorhabditis japonica From_analysis: WormBase-Compara
    Paralog: WBGene00003216 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00010353 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00011290 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015511 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in ABplpaappa; ABprpaappa; germ line; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including rotenone; manganese chloride; and Alovudine based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y62E10A.14
    Corresponding_transcript: Y62E10A.14.1
    Other_sequence: CR01024
      CBC03521_1
      CBC08429_1
    Associated_feature: WBsf998401
      WBsf231126
  Experimental_info: RNAi_result: WBRNAi00086575 Inferred_automatically: RNAi_primary
      WBRNAi00057846 Inferred_automatically: RNAi_primary
      WBRNAi00086576 Inferred_automatically: RNAi_primary
      WBRNAi00107542 Inferred_automatically: RNAi_primary
      WBRNAi00037670 Inferred_automatically: RNAi_primary
      WBRNAi00107257 Inferred_automatically: RNAi_primary
      WBRNAi00107396 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1035977
      Expr1161279
      Expr2013524
      Expr2031758
    Drives_construct: WBCnstr00029664
    Construct_product: WBCnstr00029664
    Microarray_results (14)
    Expression_cluster (189)
    Interaction (43)
  Map_info: Map: IV Position: 8.88695
    Positive: Positive_clone: Y62E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027683
    WBPaper00029058
    WBPaper00064117
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene