WormBase Tree Display for Gene: WBGene00013378
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WBGene00013378 | SMap | S_parent | Sequence | Y62E10A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | emc-3 | Person_evidence | WBPerson61 | |||||
Sequence_name | Y62E10A.10 | ||||||||
Molecular_name | Y62E10A.10 | ||||||||
Y62E10A.10.1 | |||||||||
CE22698 | |||||||||
Other_name | CELE_Y62E10A.10 | Accession_evidence | NDB | BX284604 | |||||
Public_name | emc-3 | ||||||||
DB_info | Database | AceView | gene | 4O146 | |||||
WormQTL | gene | WBGene00013378 | |||||||
WormFlux | gene | WBGene00013378 | |||||||
NDB | locus_tag | CELE_Y62E10A.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013378|UniProtKB=Q9U1X6 | |||||||
family | PTHR13116 | ||||||||
NCBI | gene | 178300 | |||||||
RefSeq | protein | NM_070174.8 | |||||||
TrEMBL | UniProtAcc | Q9U1X6 | |||||||
UniProt_GCRP | UniProtAcc | Q9U1X6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 11 Dec 2012 14:02:14 | WBPerson2970 | Name_change | CGC_name | emc-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | emc | ||||||||
Allele (26) | |||||||||
Strain | WBStrain00037776 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00098495 | ||||||||
00098496 | |||||||||
00098497 | |||||||||
00120259 | |||||||||
Contained_in_operon | CEOP4544 | ||||||||
Ortholog (35) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Predicted to be part of EMC complex. Is an ortholog of human EMC3 (ER membrane protein complex subunit 3). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y62E10A.10 | |||||||
Corresponding_transcript | Y62E10A.10.1 | ||||||||
Other_sequence (89) | |||||||||
Associated_feature | WBsf668476 | ||||||||
WBsf668477 | |||||||||
WBsf231123 | |||||||||
Experimental_info | RNAi_result | WBRNAi00057841 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033360 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00093608 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00093615 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00093602 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022155 | ||||||||
Expr1035975 | |||||||||
Expr1161275 | |||||||||
Expr2011307 | |||||||||
Expr2029543 | |||||||||
Drives_construct | WBCnstr00029666 | ||||||||
Construct_product | WBCnstr00029666 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (76) | |||||||||
Interaction | WBInteraction000032390 | ||||||||
WBInteraction000520679 | |||||||||
WBInteraction000551521 | |||||||||
WBInteraction000582618 | |||||||||
Map_info | Map | IV | Position | 8.84302 | |||||
Positive | Positive_clone | Y62E10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |