WormBase Tree Display for Gene: WBGene00013340

WBGene00013340 SMap: S_parent: Sequence: Y59A8A
  Identity: Version: 2
    Name: CGC_name: tcc-1 Person_evidence: WBPerson732
      Sequence_name: Y59A8A.3
      Molecular_name: Y59A8A.3
        Y59A8A.3.1
        CE26201
      Other_name: CELE_Y59A8A.3 Accession_evidence: NDB BX284605
      Public_name: tcc-1
    DB_info: Database: AceView gene 5S326
        WormQTL gene WBGene00013340
        WormFlux gene WBGene00013340
        NDB locus_tag CELE_Y59A8A.3
        NCBI gene 180167
        RefSeq protein NM_075105.6
        TREEFAM TREEFAM_ID TF343230
        TrEMBL UniProtAcc Q9GRZ9
        UniProt_GCRP UniProtAcc Q9GRZ9
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 25 May 2012 15:57:08 WBPerson2970 Name_change: CGC_name: tcc-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tcc
    Allele (176)
    RNASeq_FPKM (74)
    GO_annotation: 00092301
      00092302
      00092303
      00092304
    Ortholog: WBGene00028059 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00073032 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00161837 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00134798 Caenorhabditis japonica From_analysis: Inparanoid_8
      CBOVI.g1207 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g2400 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4887 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18428 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3277 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4679 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14797 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7525 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23411 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00699.g13527 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-tcc-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21872 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00845.g16034 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_24324 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_021834 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50406400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g17568 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enables kinesin binding activity. Involved in spindle localization. Located in endoplasmic reticulum membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y59A8A.3
    Corresponding_transcript: Y59A8A.3.1
    Other_sequence: CRC01858_1
      CR01258
      CR01166
      CRC02762_1
      CR02165
    Associated_feature: WBsf669831
      WBsf669832
      WBsf982070
      WBsf1002753
      WBsf1002754
      WBsf1021349
      WBsf1021350
      WBsf235180
  Experimental_info: RNAi_result: WBRNAi00033539 Inferred_automatically: RNAi_primary
      WBRNAi00057738 Inferred_automatically: RNAi_primary
      WBRNAi00082919 Inferred_automatically: RNAi_primary
      WBRNAi00114738 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11030
      Expr1028777
      Expr1035956
      Expr1161163
      Expr2017361
      Expr2035498
    Drives_construct: WBCnstr00017862
    Construct_product: WBCnstr00017862
    Microarray_results (18)
    Expression_cluster (152)
    Interaction (34)
  Map_info: Map: V Position: 13.3121
    Positive: Positive_clone: Y59A8A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00035598
    WBPaper00042433
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene