WormBase Tree Display for Gene: WBGene00013294
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WBGene00013294 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pals-30 | Person_evidence | WBPerson260 | |||
Sequence_name | Y57G11B.1 | ||||||
Molecular_name | Y57G11B.1 | ||||||
WP:CE16665 | |||||||
CE16665 | |||||||
Y57G11B.1.1 | |||||||
Other_name | CELE_Y57G11B.1 | Accession_evidence | NDB | BX284604 | |||
Public_name | pals-30 | ||||||
DB_info | Database | AceView | gene | 4P306 | |||
WormQTL | gene | WBGene00013294 | |||||
WormFlux | gene | WBGene00013294 | |||||
NDB | locus_tag | CELE_Y57G11B.1 | |||||
NCBI | gene | 190365 | |||||
RefSeq | mRNA | NM_070365.1 | |||||
protein | NP_502766.1 | ||||||
NM_070365.2 | |||||||
TREEFAM | TREEFAM_ID | TF322379 | |||||
UniProt | UniProtAcc | G5EF79 | |||||
TrEMBL | UniProtAcc | G5EF79 | |||||
UniProt_GCRP | UniProtAcc | G5EF79 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pals | ||||||
Allele (97) | |||||||
RNASeq_FPKM (74) | |||||||
Contained_in_operon | CEOP4603 | ||||||
Ortholog | WBGene00142109 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||
WBGene00161337 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||
WBGene00061028 | Caenorhabditis remanei | From_analysis | OMA | ||||
Sp34_30320300 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||
chrIV_pilon.g12495 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog (11) | |||||||
Structured_description | Automated_description | Enriched in NSM based on tiling array studies. Is affected by several genes including daf-16; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including Mercuric Chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y57G11B.1 | |||||
Corresponding_transcript | Y57G11B.1.1 | ||||||
Associated_feature | WBsf1018665 | ||||||
WBsf1018666 | |||||||
Experimental_info | RNAi_result | WBRNAi00037589 | Inferred_automatically | RNAi_primary | |||
WBRNAi00021130 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057676 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1025596 | ||||||
Expr1161082 | |||||||
Expr2014702 | |||||||
Expr2032938 | |||||||
Drives_construct | WBCnstr00029707 | ||||||
Construct_product | WBCnstr00029707 | ||||||
Microarray_results (13) | |||||||
Expression_cluster (128) | |||||||
Interaction (104) | |||||||
Map_info | Positive | Positive_clone | Y57G11B | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | IV | 12.2282 | |||||
Reference | WBPaper00061319 | ||||||
WBPaper00062345 | |||||||
Method | Gene |