WormBase Tree Display for Gene: WBGene00013166

WBGene00013166 SMap: S_parent: Sequence: Y53F4B
  Identity: Version: 1
    Name: Sequence_name: Y53F4B.20
      Molecular_name: Y53F4B.20
        Y53F4B.20.1
        CE48528
      Other_name: CELE_Y53F4B.20 Accession_evidence: NDB BX284602
      Public_name: Y53F4B.20
    DB_info: Database: AceView gene 2P375
        WormQTL gene WBGene00013166
        WormFlux gene WBGene00013166
        NDB locus_tag CELE_Y53F4B.20
        Panther gene CAEEL|WormBase=WBGene00013166|UniProtKB=Q9NAA0
          family PTHR11533
        NCBI gene 175160
        RefSeq protein NM_064704.6
        TREEFAM TREEFAM_ID TF315550
        TrEMBL UniProtAcc Q9NAA0
        UniProt_GCRP UniProtAcc Q9NAA0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (107)
    Strain: WBStrain00033254
    RNASeq_FPKM (74)
    GO_annotation: 00095874
      00095875
      00095876
      00095877
      00095878
      00095879
      00095880
    Ortholog (26)
    Paralog (13)
    Structured_description: Automated_description: Predicted to enable metalloaminopeptidase activity; peptide binding activity; and zinc ion binding activity. Predicted to be involved in peptide catabolic process and proteolysis. Predicted to be located in cytoplasm. Is an ortholog of human LVRN (laeverin). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y53F4B.20
    Corresponding_CDS_history: Y53F4B.20:wp109
      Y53F4B.20:wp239
    Corresponding_transcript: Y53F4B.20.1
    Associated_feature: WBsf990893
      WBsf990894
      WBsf990895
      WBsf1013945
      WBsf222535
  Experimental_info: RNAi_result: WBRNAi00057274 Inferred_automatically: RNAi_primary
      WBRNAi00103608 Inferred_automatically: RNAi_primary
      WBRNAi00020938 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019856
      Expr1035848
      Expr1160712
      Expr2007850
      Expr2026090
    Microarray_results (15)
    Expression_cluster: WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:BAG-neuron_embryo_enriched
      WBPaper00037950:BAG-neuron_embryo_SelectivelyEnriched
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00044426:rotenone_24h_downregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00045774:clk-1_downregulated
      WBPaper00046121:ecdoderm_unique
      WBPaper00048988:daf-2(e1370)_daf-16(mu86)_downregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_downregulated
      WBPaper00049489:AMsh-glia_enriched
      WBPaper00049498:npr-1(ur89)_regulated_4
      WBPaper00050332:skn-1(RNAi)_downregulated
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:arcade_intestinal-valve_enriched
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00051558:aging_regulated
      WBPaper00053295:lin-22(icb38)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053321:PGCs_depleted_NuGen
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
      WBPaper00053771:down_by_skn-1(RNAi)_at_24h-NaCl
      WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
      WBPaper00053771:up_at_24h-NaCl
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055971:nhl-2(ok818)_20C_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056167:Cry5B_upregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058711:paraquat_upregulated
      WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:ADL_parent
      WBPaper00061340:AIB
      WBPaper00061340:AIM
      WBPaper00061340:AIZ
      WBPaper00061340:ASE
      WBPaper00061340:ASE_parent
      WBPaper00061340:AVG
      WBPaper00061340:BAG
      WBPaper00061340:M1_parent
      WBPaper00061340:mc3
      WBPaper00061340:Neuroblast_AVG_RIR
      WBPaper00061340:Pharyngeal_intestinal_valve
      WBPaper00061340:pm1_pm2
      WBPaper00061340:RIH
      WBPaper00061340:RIS
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:mep-1(ne4629)_upregulated
      WBPaper00061527:C54G4.4-Y45F3A.8
      WBPaper00061753:csr-1(tor159)_upregulated_20C
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00062497:xpf-1(tm2842)_upregulated
      WBPaper00062534:fat-P-80_downregulated_ech-6(RNAi)
      WBPaper00062590:Aging_downregulated_neuron
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064509:static-magnetic-field_downregulated
      WBPaper00064721:fasn-1(g14)_downregulated_starved
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065029:cadmium_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065749:endu-2(tm4977)_upregulated
      WBPaper00065841:50_0
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066232:ash-2(RNAi)_upregulated_WT
      WBPaper00066232:hsf-1(RNAi)_downregulated_ash-2
      cgc4489_group_13
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00036286:Pattern_F
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00047070:N2_UV_downregulated
      WBPaper00047070:xpa-1_UV_downregulated
      WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
      WBPaper00048989:N2_allantoin_upregulated
    Interaction: WBInteraction000573764
  Map_info: Positive: Positive_clone: Y53F4B Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 24.0291
  Reference: WBPaper00055090
  Method: Gene