WormBase Tree Display for Gene: WBGene00013154
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| WBGene00013154 | SMap | S_parent | Sequence | Y53F4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y53F4B.7 | |||||||
| Molecular_name | Y53F4B.7 | ||||||||
| Y53F4B.7.1 | |||||||||
| CE25406 | |||||||||
| Other_name | CELE_Y53F4B.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y53F4B.7 | ||||||||
| DB_info | Database | AceView | gene | 2P275 | |||||
| WormQTL | gene | WBGene00013154 | |||||||
| WormFlux | gene | WBGene00013154 | |||||||
| NDB | locus_tag | CELE_Y53F4B.7 | |||||||
| NCBI | gene | 190210 | |||||||
| RefSeq | protein | NM_064691.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322172 | |||||||
| TrEMBL | UniProtAcc | G5EFS8 | |||||||
| UniProt_GCRP | UniProtAcc | G5EFS8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01499702 | ||||||||
| WBVar02120969 | |||||||||
| WBVar01498435 | |||||||||
| WBVar01548200 | |||||||||
| WBVar02120825 | |||||||||
| WBVar02124340 | |||||||||
| WBVar02120663 | |||||||||
| WBVar02122372 | |||||||||
| WBVar01498941 | |||||||||
| WBVar01499314 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00013172 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in ABalaaaarl; ABalaaaarr; XXXL; XXXR; and pharynx based on microarray and single-cell RNA-seq studies. Is affected by several genes including eat-2; clk-1; and pgl-1 based on microarray and RNA-seq studies. Is affected by six chemicals including Sodium Chloride; Rifampin; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y53F4B.7 | |||||||
| Corresponding_transcript | Y53F4B.7.1 | ||||||||
| Associated_feature | WBsf1013934 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00075581 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020927 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075585 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075586 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057299 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075582 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075583 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1160736 | ||||||||
| Expr2007861 | |||||||||
| Expr2026103 | |||||||||
| Microarray_results | SMD_Y53F4B.J | ||||||||
| A_12_P158461 | |||||||||
| A_12_P158462 | |||||||||
| A_12_P158463 | |||||||||
| GPL3518_CE25406 | |||||||||
| GPL9450_Y53F4B.7 | |||||||||
| cea2.d.45020 | |||||||||
| Expression_cluster (38) | |||||||||
| SAGE_tag | SAGE:agatgtgtgt | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:agatgtgtgtgcaagaa | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Map_info | Positive | Positive_clone | Y53F4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 23.895 | |||||||
| Method | Gene |
