WormBase Tree Display for Gene: WBGene00013150

WBGene00013150 SMap: S_parent: Sequence: Y53F4B
  Identity: Version: 2
    Name: CGC_name: pole-4
      Sequence_name: Y53F4B.3
      Molecular_name: Y53F4B.3
        Y53F4B.3.1
        CE22389
      Other_name: CELE_Y53F4B.3 Accession_evidence: NDB BX284602
      Public_name: pole-4
    DB_info: Database: AceView gene 2P254
        WormQTL gene WBGene00013150
        WormFlux gene WBGene00013150
        NDB locus_tag CELE_Y53F4B.3
        Panther gene CAEEL|WormBase=WBGene00013150|UniProtKB=Q9NAC5
          family PTHR10252
        NCBI gene 175152
        RefSeq protein NM_064686.5
        TREEFAM TREEFAM_ID TF103009
        TrEMBL UniProtAcc Q9NAC5
        UniProt_GCRP UniProtAcc Q9NAC5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Nov 2018 16:28:49 WBPerson1983 Name_change: CGC_name: pole-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pole
    Allele (23)
    Strain: WBStrain00037692
      WBStrain00051053
    RNASeq_FPKM (74)
    GO_annotation: 00095944
      00095945
      00095946
      00095947
      00095948
      00095949
      00120079
    Ortholog: WBGene00054468 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00054471 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039803 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00161388 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00123296 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00112161 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00217537 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00230515 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g6336 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10300 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g11216 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14688 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g9760 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g27149 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3659 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g10003 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g15605 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g26963 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g5711 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-Y53F4B.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold581.g4566 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01735.g22803 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09818 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006639 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09266 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16940 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20057100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g6633 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248402 Onchocerca volvulus From_analysis: WormBase-Compara
      SGD:S000000482 Saccharomyces cerevisiae From_analysis: Inparanoid
            OrthoFinder
      FB:FBgn0034726 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
      ZFIN:ZDB-GENE-050522-309 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
      HGNC:18755 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      MGI:1914229 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            SonicParanoid
      RGD:1307793 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            SonicParanoid
    Paralog: WBGene00009584 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00017742 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable protein heterodimerization activity. Predicted to be involved in DNA-templated DNA replication. Predicted to be located in nucleus. Predicted to be part of epsilon DNA polymerase complex. Is an ortholog of human POLE4 (DNA polymerase epsilon 4, accessory subunit). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y53F4B.3
    Corresponding_transcript: Y53F4B.3.1
    Associated_feature: WBsf978593
      WBsf990866
      WBsf990867
      WBsf1013931
      WBsf224313
    Transcription_factor: WBTranscriptionFactor000493
  Experimental_info: RNAi_result: WBRNAi00037423 Inferred_automatically: RNAi_primary
      WBRNAi00086208 Inferred_automatically: RNAi_primary
      WBRNAi00086207 Inferred_automatically: RNAi_primary
      WBRNAi00061936 Inferred_automatically: RNAi_primary
      WBRNAi00020921 Inferred_automatically: RNAi_primary
      WBRNAi00057283 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020018
      Expr1035839
      Expr1160722
      Expr2007857
      Expr2026099
    Drives_construct: WBCnstr00029740
    Construct_product: WBCnstr00029740
    Microarray_results (19)
    Expression_cluster (125)
    Interaction (37)
  Map_info: Map: II Position: 23.8272
    Positive: Positive_clone: Y53F4B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00027681
    WBPaper00038491
    WBPaper00055090
    WBPaper00059720
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene