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WormBase Tree Display for Gene: WBGene00013103

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Name Class

WBGene00013103SMapS_parentSequenceY51H4A
IdentityVersion2
NameCGC_nameuroc-1Person_evidenceWBPerson42707
Sequence_nameY51H4A.7
Molecular_nameY51H4A.7
Y51H4A.7.1
CE35671
Y51H4A.7.2
Other_nameCELE_Y51H4A.7Accession_evidenceNDBBX284604
Public_nameuroc-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
216 Feb 2022 12:47:28WBPerson51134Name_changeCGC_nameuroc-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classuroc
Allele (116)
RNASeq_FPKM (74)
GO_annotation00096002
00096003
00096004
00096005
00096006
00096007
00096008
00096009
00120051
OrthologWBGene00034419Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00070942Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00141706Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00078441Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00084118Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00083965Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00136751Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00082216Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00085282Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g8092Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10710Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4727Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7625Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g189Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9620Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2139Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8665Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10017Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25059Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g27275Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14298Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_05158.g19398Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13335.g24184Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-Y51H4A.7Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17272Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01784.g23123Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05591Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_05592Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_05594Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_012340Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_012377Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_012378Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_012420Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12155Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22301Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40194100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g12750Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00072292Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00078440Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00083246Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00084321Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00113191Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00268142Strongyloides rattiFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-081022-148Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:26444Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2385332Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1587777Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00045281Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
Structured_descriptionAutomated_descriptionPredicted to enable urocanate hydratase activity. Predicted to be involved in histidine catabolic process. Human ortholog(s) of this gene implicated in urocanase deficiency. Is an ortholog of human UROC1 (urocanate hydratase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0112180Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:26444)
Molecular_infoCorresponding_CDSY51H4A.7
Corresponding_CDS_historyY51H4A.7:wp109
Corresponding_transcriptY51H4A.7.1
Y51H4A.7.2
Other_sequence (53)
Associated_featureWBsf652408
WBsf998890
WBsf998891
WBsf1018881
WBsf1018882
WBsf1018883
WBsf1018884
WBsf231279
Experimental_infoRNAi_resultWBRNAi00037369Inferred_automaticallyRNAi_primary
WBRNAi00062446Inferred_automaticallyRNAi_primary
WBRNAi00000898Inferred_automaticallyRNAi_primary
WBRNAi00057194Inferred_automaticallyRNAi_primary
Expr_patternExpr1021745
Expr1035815
Expr1160627
Expr2007794
Expr2026033
Microarray_results (19)
Expression_cluster (189)
Interaction (7)
Map_infoMapIVPosition15.0984
PositivePositive_cloneY51H4AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00035429
WBPaper00038491
WBPaper00055090
WBPaper00064232
WBPaper00065140
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene