WormBase Tree Display for Gene: WBGene00013077

WBGene00013077 SMap: S_parent: Sequence: Y51A2D
  Identity: Version: 2
    Name: CGC_name: ttr-24
      Sequence_name: Y51A2D.9
      Molecular_name: Y51A2D.9a
        Y51A2D.9a.1
        CE19205
        Y51A2D.9b
        CE46774
        Y51A2D.9b.1
      Other_name: CELE_Y51A2D.9 Accession_evidence: NDB BX284605
      Public_name: ttr-24
    DB_info: Database: AceView gene 5T36
        WormQTL gene WBGene00013077
        WormFlux gene WBGene00013077
        NDB locus_tag CELE_Y51A2D.9
        Panther gene CAEEL|WormBase=WBGene00013077|UniProtKB=Q9XXR4
          family PTHR21700
        NCBI gene 180209
        RefSeq protein NM_001269884.3
            NM_001269883.3
        TREEFAM TREEFAM_ID TF315773
        TrEMBL UniProtAcc Q9XXR4
            H2KMI9
        UniProt_GCRP UniProtAcc Q9XXR4
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 20 Sep 2007 11:48:01 WBPerson2970 Name_change: CGC_name: ttr-24
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    Allele (36)
    RNASeq_FPKM (74)
    GO_annotation: 00021349
      00120033
    Ortholog: WBGene00033771 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00069812 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00147793 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00138096 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00129906 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            WormBase-Compara
      CBOVI.g1612 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g1613 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g8942 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7313 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1151 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2301 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g6731 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g12493 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22533 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3781 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00987.g15240 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_05994.g19982 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g21773 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_02171.g25220 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19577 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_022040 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50416900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_50431600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g17721 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (62)
    Structured_description: Automated_description: Predicted to be located in cell surface and extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y51A2D.9a
      Y51A2D.9b
    Corresponding_transcript: Y51A2D.9a.1
      Y51A2D.9b.1
    Other_sequence: CBC12184_1
      CJC00476_1
      CBC14844_1
      MCC06224_1
      AE01877
      AYC00609_1
      FD517500.1
      CSC00875_1
      CJC00947_1
    Associated_feature: WBsf653535
      WBsf1002935
      WBsf1021495
  Experimental_info: RNAi_result: WBRNAi00000470 Inferred_automatically: RNAi_primary
      WBRNAi00057142 Inferred_automatically: RNAi_primary
      WBRNAi00033439 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012243
      Expr1160588
      Expr2017589
      Expr2035728
    Microarray_results (21)
    Expression_cluster (169)
    Interaction (208)
  Map_info: Map: V Position: 16.8687 Error: 0.009949
    Positive: Positive_clone: Y51A2D Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00033099
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene