WormBase Tree Display for Gene: WBGene00013042

WBGene00013042 SMap: S_parent: Sequence: Y49E10
  Identity: Version: 4
    Name: CGC_name: cccp-1 Paper_evidence: WBPaper00045066
          Person_evidence: WBPerson625
            WBPerson567
            WBPerson2812
      Sequence_name: Y49E10.23
      Molecular_name: Y49E10.23a
        Y49E10.23a.1
        CE22238
        Y49E10.23b
        CE32078
        Y49E10.23b.1
      Other_name: unc-81 Person_evidence: WBPerson261
        CELE_Y49E10.23 Accession_evidence: NDB BX284603
      Public_name: cccp-1
    DB_info: Database: AceView gene 3N573
        WormQTL gene WBGene00013042
        WormFlux gene WBGene00013042
        NDB locus_tag CELE_Y49E10.23
        Panther gene CAEEL|WormBase=WBGene00013042|UniProtKB=Q8I0Z1
          family PTHR18911
        NCBI gene 176674
        RefSeq protein NM_067227.7
            NM_181971.6
        TREEFAM TREEFAM_ID TF328785
        TrEMBL UniProtAcc Q8I0Z1
            Q9XTT2
        UniProt_GCRP UniProtAcc Q8I0Z1
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 21 Dec 2010 12:16:25 WBPerson2970 Name_change: CGC_name: cccp-1
        3 30 Apr 2014 16:40:52 WBPerson2970 Name_change: Other_name: unc-81
        4 10 Jun 2014 12:12:12 WBPerson1983 Event: Acquires_merge: WBGene00006813
      Acquires_merge: WBGene00006813
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cccp
    Reference_allele: WBVar00143762
    Allele (261)
    Legacy_information: e1122 : slightly irregular movement. ES1 ME3. NA1.
      See also e1122
      [C.elegansII] e1122 : slightly irregular movement. ES1 ME3. NA1. [CB; ZZ]
    Strain: WBStrain00004247
      WBStrain00006664
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog: WBGene00032833 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00072818 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00163112 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135849 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00108416 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00226957 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g4513 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g11958 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4370 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13637 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g13639 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11300 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22407 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10616 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21815 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g25408 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g6564 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g6566 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4554 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00004.g367 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-cccp-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8753 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02032.g24488 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_03366.g29955 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_011075 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05062 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_30296600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g9199 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241933 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00267004 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00289497 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0036614 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-100318-3 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
      HGNC:24349 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:2445022 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1307158 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
    Structured_description: Automated_description: Enables small GTPase binding activity. Involved in dense core granule maturation and regulation of locomotion involved in locomotory behavior. Located in axon; neuronal cell body; and perinuclear region of cytoplasm. Expressed in intestine and spermatheca. Is an ortholog of human CCDC186 (coiled-coil domain containing 186). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y49E10.23a
      Y49E10.23b
    Corresponding_CDS_history: Y49E10.23:wp88
    Corresponding_transcript: Y49E10.23a.1
      Y49E10.23b.1
    Other_sequence (25)
    Associated_feature: WBsf645661
      WBsf645662
      WBsf659609
      WBsf994654
      WBsf994655
      WBsf1016204
      WBsf225911
      WBsf225912
  Experimental_info: RNAi_result: WBRNAi00037295 Inferred_automatically: RNAi_primary
      WBRNAi00007127 Inferred_automatically: RNAi_primary
      WBRNAi00057020 Inferred_automatically: RNAi_primary
      WBRNAi00007148 Inferred_automatically: RNAi_primary
      WBRNAi00020778 Inferred_automatically: RNAi_primary
      WBRNAi00092879 Inferred_automatically: RNAi_primary
      WBRNAi00057019 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11741
      Expr11743
      Expr1013507
      Expr1035798
      Expr1160462
      Expr2009754
      Expr2027994
    Drives_construct: WBCnstr00019346
      WBCnstr00019347
      WBCnstr00029772
    Construct_product: WBCnstr00019347
      WBCnstr00029772
    Microarray_results (27)
    Expression_cluster (152)
    Interaction (19)
  Map_info: Map: III Position: 17.9495 Error: 0.008502
    Positive: Positive_clone: Y49E10 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 90
      Multi_point: 89
    Pseudo_map_position
  Reference (11)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    [140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag.
  Method: Gene