WormBase Tree Display for Gene: WBGene00013024
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| WBGene00013024 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | cept-2 | Person_evidence | WBPerson1816 | |||||
| Sequence_name | Y49A3A.1 | ||||||||
| Molecular_name | Y49A3A.1 | ||||||||
| Y49A3A.1.1 | |||||||||
| CE40163 | |||||||||
| Other_name | CELE_Y49A3A.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | cept-2 | ||||||||
| DB_info | Database | AceView | gene | 5O831 | |||||
| 5O835 | |||||||||
| WormQTL | gene | WBGene00013024 | |||||||
| WormFlux | gene | WBGene00013024 | |||||||
| NDB | locus_tag | CELE_Y49A3A.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013024|UniProtKB=G5EC25 | |||||||
| family | PTHR10414 | ||||||||
| NCBI | gene | 179935 | |||||||
| RefSeq | protein | NM_074157.7 | |||||||
| TREEFAM | TREEFAM_ID | TF313270 | |||||||
| TrEMBL | UniProtAcc | G5EC25 | |||||||
| UniProt_GCRP | UniProtAcc | G5EC25 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cept | ||||||||
| Allele (65) | |||||||||
| Strain | WBStrain00037439 | ||||||||
| WBStrain00051666 | |||||||||
| WBStrain00051665 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP5412 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00009057 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018797 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | Y49A3A.1 encodes a homolog of choline/ethanolaminephosphotransferasecholine phosphotransferase 1; Y49A3A.1 shares an operon with vha-13, andthus might be a previously undescribed V-ATPase component or ancillaryprotein. | Paper_evidence | WBPaper00028773 | |||||
| WBPaper00028774 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 19 Nov 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable diacylglycerol cholinephosphotransferase activity and ethanolaminephosphotransferase activity. Predicted to be involved in phosphatidylethanolamine biosynthetic process. Predicted to be located in Golgi apparatus and endoplasmic reticulum membrane. Is an ortholog of human CHPT1 (choline phosphotransferase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y49A3A.1 | |||||||
| Corresponding_CDS_history | Y49A3A.1:wp156 | ||||||||
| Corresponding_transcript | Y49A3A.1.1 | ||||||||
| Other_sequence (43) | |||||||||
| Associated_feature | WBsf647526 | ||||||||
| WBsf662072 | |||||||||
| WBsf1001983 | |||||||||
| WBsf1001984 | |||||||||
| WBsf1001985 | |||||||||
| WBsf1020820 | |||||||||
| WBsf1020821 | |||||||||
| WBsf1020822 | |||||||||
| WBsf1020823 | |||||||||
| WBsf232907 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00026782 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009357 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024232 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023357 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056989 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024157 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023870 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028612 | ||||||||
| Expr1035789 | |||||||||
| Expr1160436 | |||||||||
| Expr2009924 | |||||||||
| Expr2028164 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction (71) | |||||||||
| Map_info | Map | V | Position | 6.24266 | |||||
| Positive | Positive_clone | Y49A3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00043645 | |||||||||
| WBPaper00045023 | |||||||||
| WBPaper00050085 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056988 | |||||||||
| WBPaper00066161 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
