WormBase Tree Display for Gene: WBGene00012967
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| WBGene00012967 | SMap | S_parent | Sequence | Y48A6B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | kvs-4 | Person_evidence | WBPerson260 | |||||
| WBPerson145 | |||||||||
| Sequence_name | Y48A6B.6 | ||||||||
| Molecular_name | Y48A6B.6a | ||||||||
| Y48A6B.6a.1 | |||||||||
| CE36457 | |||||||||
| Y48A6B.6b | |||||||||
| CE32077 | |||||||||
| Y48A6B.6c | |||||||||
| CE54270 | |||||||||
| Y48A6B.6b.1 | |||||||||
| Y48A6B.6c.1 | |||||||||
| Other_name | CELE_Y48A6B.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | kvs-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Jul 2011 16:30:08 | WBPerson2970 | Name_change | CGC_name | kvs-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | kvs | ||||||||
| Allele (189) | |||||||||
| Strain | WBStrain00055287 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (27) | |||||||||
| Contained_in_operon | CEOP3712 | ||||||||
| Ortholog (54) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Predicted to enable delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to be located in axon; plasma membrane; and somatodendritic compartment. Predicted to be part of voltage-gated potassium channel complex. Expressed in AVA and nervous system. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 26. Is an ortholog of human KCNF1 (potassium voltage-gated channel modifier subfamily F member 1) and KCNS2 (potassium voltage-gated channel modifier subfamily S member 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080461 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6231) | ||||
| DOID:1826 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6231) | ||||||
| Molecular_info | Corresponding_CDS | Y48A6B.6a | |||||||
| Y48A6B.6b | |||||||||
| Y48A6B.6c | |||||||||
| Corresponding_CDS_history | Y48A6B.6:wp88 | ||||||||
| Y48A6B.6a:wp120 | |||||||||
| Y48A6B.6b:wp275 | |||||||||
| Corresponding_transcript | Y48A6B.6a.1 | ||||||||
| Y48A6B.6b.1 | |||||||||
| Y48A6B.6c.1 | |||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf994239 | ||||||||
| WBsf994240 | |||||||||
| WBsf1015905 | |||||||||
| WBsf1015906 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006209 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037221 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006717 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056866 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020727 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056865 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12745 | ||||||||
| Expr12746 | |||||||||
| Expr15545 | |||||||||
| Expr1024741 | |||||||||
| Expr1160318 | |||||||||
| Expr2012987 | |||||||||
| Expr2031219 | |||||||||
| Drives_construct | WBCnstr00022466 | ||||||||
| Construct_product | WBCnstr00022463 | ||||||||
| WBCnstr00022727 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | III | Position | 5.85665 | Error | 0.005556 | |||
| Positive | Positive_clone | Y48A6B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027009 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049107 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062255 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
