WormBase Tree Display for Gene: WBGene00012958
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| WBGene00012958 | SMap | S_parent | Sequence | Y47H10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y47H10A.2 | |||||||
| Molecular_name | Y47H10A.2 | ||||||||
| Y47H10A.2.1 | |||||||||
| CE34511 | |||||||||
| Other_name | CELE_Y47H10A.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y47H10A.2 | ||||||||
| DB_info | Database | AceView | gene | 1M676 | |||||
| WormQTL | gene | WBGene00012958 | |||||||
| WormFlux | gene | WBGene00012958 | |||||||
| NDB | locus_tag | CELE_Y47H10A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012958|UniProtKB=Q9U2B3 | |||||||
| family | PTHR21503 | ||||||||
| NCBI | gene | 190007 | |||||||
| RefSeq | protein | NM_060652.4 | |||||||
| TREEFAM | TREEFAM_ID | TF315367 | |||||||
| TrEMBL | UniProtAcc | Q9U2B3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U2B3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (94) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (96) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in germ line; hypodermis; muscle cell; sensory neurons; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on microarray and RNA-seq studies. Is affected by nine chemicals including stavudine; metformin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y47H10A.2 | |||||||
| Corresponding_CDS_history | Y47H10A.2:wp104 | ||||||||
| Corresponding_transcript | Y47H10A.2.1 | ||||||||
| Other_sequence | MH04287 | ||||||||
| JI483667.1 | |||||||||
| Associated_feature | WBsf649650 | ||||||||
| WBsf220397 | |||||||||
| WBsf220398 | |||||||||
| WBsf220399 | |||||||||
| WBsf220400 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037199 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056831 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024161 | ||||||||
| Expr1035746 | |||||||||
| Expr1160289 | |||||||||
| Expr2007639 | |||||||||
| Expr2025877 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (88) | |||||||||
| Map_info | Positive | Positive_clone | Y47H10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 13.05 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
