WormBase Tree Display for Gene: WBGene00012940

WBGene00012940 SMap: S_parent: Sequence: Y47D3B
  Identity: Version: 2
    Name: Sequence_name: Y47D3B.3
      Molecular_name: Y47D3B.3
        Y47D3B.3.1
        CE43484
      Other_name: CELE_Y47D3B.3 Accession_evidence: NDB BX284603
      Public_name: Y47D3B.3
    DB_info: Database: AceView gene 3M493
        WormQTL gene WBGene00012940
        WormFlux gene WBGene00012940
        NDB locus_tag CELE_Y47D3B.3
        Panther gene CAEEL|WormBase=WBGene00012940|UniProtKB=Q9XX04
          family PTHR35572
        NCBI gene 189979
        RefSeq protein NM_067067.5
        TREEFAM TREEFAM_ID TF353007
        TrEMBL UniProtAcc Q9XX04
        UniProt_GCRP UniProtAcc Q9XX04
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 27 Feb 2009 10:36:38 WBPerson1983 Event: Split_into: WBGene00185055
      Split_into: WBGene00185055
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00409343
      WBVar00409344
      WBVar00409345
      WBVar00409346
      WBVar00409347
      WBVar00409348
      WBVar00409349
      WBVar00409350
      WBVar00409351
      WBVar00409352
      WBVar00409353
      WBVar02095951
      WBVar00409354
      WBVar02030650
      WBVar02095952
      WBVar02095953
      WBVar02030651
      WBVar02095954
      WBVar02030652
      WBVar02030653
      WBVar00179843
      WBVar00179844
      WBVar00179845
      WBVar00179846
      WBVar00179847
      WBVar00179848
      WBVar00179849
      WBVar00179850
      WBVar00179851
      WBVar00179852
      WBVar01771214
      WBVar01629584
      WBVar01629585
      WBVar01771215
      WBVar01629586
      WBVar01771216
      WBVar01771217
      WBVar01646336
      WBVar01646337
      WBVar01646338
      WBVar01646339
      WBVar01646340
      WBVar01646341
      WBVar01646342
      WBVar01646343
      WBVar01646344
      WBVar01646345
      WBVar01499774
      WBVar01416558
      WBVar01919221
      WBVar01334884
      WBVar01702128
      WBVar01702129
      WBVar01269802
      WBVar01702130
      WBVar01579066
      WBVar01702131
      WBVar01507749
      WBVar02075928
      WBVar01499437
      WBVar01723801
      WBVar01499438
      WBVar01723802
      WBVar01409633
      WBVar01723803
      WBVar01723804
      WBVar01409635
      WBVar01723805
      WBVar01409636
      WBVar01723806
      WBVar01723807
      WBVar01723808
      WBVar01723809
      WBVar01995863
      WBVar01995864
      WBVar01995865
      WBVar00862387
      WBVar01480501
      WBVar00862388
      WBVar00862389
      WBVar00862390
      WBVar00862391
      WBVar00862392
      WBVar00862393
      WBVar00862394
      WBVar00862395
      WBVar00862396
      WBVar00862397
      WBVar00862398
      WBVar00862399
      WBVar00862400
      WBVar00862401
      WBVar00862402
      WBVar00862403
      WBVar00862404
      WBVar00862405
      WBVar00862406
      WBVar00862407
      WBVar00862408
      WBVar00862409
      WBVar00862410
      WBVar00862411
      WBVar02019280
      WBVar00862412
      WBVar02019281
      WBVar00247314
      WBVar00247316
      WBVar00247317
      WBVar01963326
      WBVar00247318
      WBVar01963327
      WBVar01963328
      WBVar01963329
      WBVar00260000
      WBVar02106969
      WBVar02106970
      WBVar02106971
      WBVar01397602
      WBVar02045750
    RNASeq_FPKM (74)
    Ortholog (24)
    Paralog: WBGene00003249 Caenorhabditis elegans From_analysis: Panther
      WBGene00009626 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00011694 Caenorhabditis elegans From_analysis: Panther
      WBGene00012545 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00013884 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Enriched in hypodermis and rectal epithelial cell based on single-cell RNA-seq studies. Is affected by several genes including eat-2; clk-1; and dpy-7 based on microarray and RNA-seq studies. Is affected by nine chemicals including multi-walled carbon nanotube; Alovudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Abnormal cell migration protein 18-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y47D3B.3
    Corresponding_CDS_history: Y47D3B.3:wp59
      Y47D3B.3:wp130
      Y47D3B.3:wp200
    Corresponding_transcript: Y47D3B.3.1
    Other_sequence: JI180218.1
      Oden_isotig26693
      JI243137.1
      CK850623.1
      WBC01953_1
    Associated_feature: WBsf645613
      WBsf994371
      WBsf1015992
  Experimental_info: Expr_pattern: Expr1019533
      Expr1035736
      Expr1160226
      Expr2007611
      Expr2025848
    Drives_construct: WBCnstr00029783
    Construct_product: WBCnstr00029783
    Microarray_results: GPL14144_Y47D3B.3_669-728_0.949_3_C
      GPL14144_Y47D3B.3_682-741_0.958_2_B
      GPL14144_Y47D3B.3_685-744_0.962_1_A
      GPL19516_CGZ0046950
      GPL21109_Y47D3B.3
      GPL8673_Y47D3B_3P00377
      GPL8673_Y47D3B_3P00738
    Expression_cluster (92)
    Interaction: WBInteraction000293622
      WBInteraction000342233
      WBInteraction000426021
  Map_info: Positive: Positive_clone: Y47D3B Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III 9.16695
  Method: Gene