WormBase Tree Display for Gene: WBGene00012937
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| WBGene00012937 | SMap | S_parent | Sequence | Y47D3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y47D3A.31 | |||||||
| Molecular_name | Y47D3A.31 | ||||||||
| Y47D3A.31.1 | |||||||||
| CE22031 | |||||||||
| Other_name | CELE_Y47D3A.31 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y47D3A.31 | ||||||||
| DB_info | Database | AceView | gene | 3M246 | |||||
| WormQTL | gene | WBGene00012937 | |||||||
| WormFlux | gene | WBGene00012937 | |||||||
| NDB | locus_tag | CELE_Y47D3A.31 | |||||||
| NCBI | gene | 176545 | |||||||
| RefSeq | protein | NM_001027707.5 | |||||||
| TREEFAM | TREEFAM_ID | TF316899 | |||||||
| TrEMBL | UniProtAcc | Q7YWP8 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YWP8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00408848 | ||||||||
| WBVar00408849 | |||||||||
| WBVar00860862 | |||||||||
| WBVar00860863 | |||||||||
| WBVar00860864 | |||||||||
| WBVar00860865 | |||||||||
| WBVar01499774 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00020905 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022621 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on microarray studies. Is affected by several genes including daf-2; eat-2; and sek-1 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including Ethanol; tryptophan; and methylmercury hydroxide based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: AH/BAR domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y47D3A.31 | |||||||
| Corresponding_transcript | Y47D3A.31.1 | ||||||||
| Other_sequence | FG621215.1 | ||||||||
| Associated_feature | WBsf227551 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020693 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1012979 | ||||||||
| Expr1035734 | |||||||||
| Expr1160215 | |||||||||
| Expr2025843 | |||||||||
| Microarray_results | SMD_Y47D3A.F | ||||||||
| A_12_P100968 | |||||||||
| Aff_Y47D3A.F | |||||||||
| GPL14144_Y47D3A.31_503-562_0.966_1_A | |||||||||
| GPL19516_CGZ0046919 | |||||||||
| GPL21109_Y47D3A.31 | |||||||||
| GPL8304_CE_WBGene00012937_A | |||||||||
| GPL8673_Y47D3A_31P00186 | |||||||||
| GPL8673_Y47D3A_31P00282 | |||||||||
| GPL8673_Y47D3A_31P00387 | |||||||||
| Expression_cluster (126) | |||||||||
| Map_info | Positive | Positive_clone | Y47D3A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 6.57923 | |||||||
| Method | Gene |
